FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623036_a_at:

>probe:Drosophila_2:1623036_a_at:289:377; Interrogation_Position=3981; Antisense; GAAGCAAGCTGCCAAATCGCGGAGA
>probe:Drosophila_2:1623036_a_at:444:445; Interrogation_Position=4004; Antisense; GATGCAACAAGAAGCTCCCTGATTT
>probe:Drosophila_2:1623036_a_at:393:311; Interrogation_Position=4047; Antisense; GCCAGCCATCGCAGTAAAGCCATTT
>probe:Drosophila_2:1623036_a_at:144:205; Interrogation_Position=4063; Antisense; AAGCCATTTCGTATTAGCGGCCAAA
>probe:Drosophila_2:1623036_a_at:336:5; Interrogation_Position=4075; Antisense; ATTAGCGGCCAAATCGACGAACAAA
>probe:Drosophila_2:1623036_a_at:662:675; Interrogation_Position=4123; Antisense; TAGCATTTCGTAGAGCTGCTCAGAA
>probe:Drosophila_2:1623036_a_at:632:649; Interrogation_Position=4142; Antisense; TCAGAATACATTCCATACCGCCATA
>probe:Drosophila_2:1623036_a_at:103:223; Interrogation_Position=4181; Antisense; AAGGGCAGCTTACACTTTTCATATG
>probe:Drosophila_2:1623036_a_at:60:119; Interrogation_Position=4283; Antisense; AGCTAACTCTGTGTAATCATTCTGA
>probe:Drosophila_2:1623036_a_at:542:423; Interrogation_Position=4306; Antisense; GAGACACATCGATCAACTAATGCAA
>probe:Drosophila_2:1623036_a_at:729:653; Interrogation_Position=4332; Antisense; TAAGTACTACTGCACAGGCCTGAGC
>probe:Drosophila_2:1623036_a_at:28:69; Interrogation_Position=4347; Antisense; AGGCCTGAGCTACCGATCTTAAAGT
>probe:Drosophila_2:1623036_a_at:634:201; Interrogation_Position=4384; Antisense; AACCAACCATATCAAGCAACCGACA
>probe:Drosophila_2:1623036_a_at:188:635; Interrogation_Position=4472; Antisense; TCATCTTTAGGATAACCGGGTGTAT

Paste this into a BLAST search page for me
GAAGCAAGCTGCCAAATCGCGGAGAGATGCAACAAGAAGCTCCCTGATTTGCCAGCCATCGCAGTAAAGCCATTTAAGCCATTTCGTATTAGCGGCCAAAATTAGCGGCCAAATCGACGAACAAATAGCATTTCGTAGAGCTGCTCAGAATCAGAATACATTCCATACCGCCATAAAGGGCAGCTTACACTTTTCATATGAGCTAACTCTGTGTAATCATTCTGAGAGACACATCGATCAACTAATGCAATAAGTACTACTGCACAGGCCTGAGCAGGCCTGAGCTACCGATCTTAAAGTAACCAACCATATCAAGCAACCGACATCATCTTTAGGATAACCGGGTGTAT

Full Affymetrix probeset data:

Annotations for 1623036_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720