FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623048_a_at:

>probe:Drosophila_2:1623048_a_at:544:449; Interrogation_Position=2214; Antisense; GATCCGAGACGTGTTCAACGACAGA
>probe:Drosophila_2:1623048_a_at:320:435; Interrogation_Position=2237; Antisense; GAGGACATTATCGAGCTGCAGGATG
>probe:Drosophila_2:1623048_a_at:284:607; Interrogation_Position=2268; Antisense; TGAGTCCTATACCATCTTTGCGAAG
>probe:Drosophila_2:1623048_a_at:497:41; Interrogation_Position=2321; Antisense; ATCGGCACCGAGACCATGAATCTAG
>probe:Drosophila_2:1623048_a_at:388:661; Interrogation_Position=2370; Antisense; TAACTCGTAATTATGGCACCGGACA
>probe:Drosophila_2:1623048_a_at:46:403; Interrogation_Position=2391; Antisense; GACATAGCCAGCTTAGACGTCGCGC
>probe:Drosophila_2:1623048_a_at:675:135; Interrogation_Position=2440; Antisense; ACGCATGTTGCACGCCCTGAAGAGA
>probe:Drosophila_2:1623048_a_at:111:101; Interrogation_Position=2462; Antisense; AGAGGTGCCTCTGCTATTAAGGCAA
>probe:Drosophila_2:1623048_a_at:278:239; Interrogation_Position=2523; Antisense; AATACTCCCGAATGATATTTCCGAT
>probe:Drosophila_2:1623048_a_at:683:17; Interrogation_Position=2539; Antisense; ATTTCCGATCAGTTTTCTTGCGTTC
>probe:Drosophila_2:1623048_a_at:34:647; Interrogation_Position=2554; Antisense; TCTTGCGTTCAATCTTGGCTACTGG
>probe:Drosophila_2:1623048_a_at:516:581; Interrogation_Position=2569; Antisense; TGGCTACTGGCTGTTTTATATTCTG
>probe:Drosophila_2:1623048_a_at:276:511; Interrogation_Position=2614; Antisense; GTGAACGAGTAATTAATTCCCCTAG
>probe:Drosophila_2:1623048_a_at:411:7; Interrogation_Position=2629; Antisense; ATTCCCCTAGCAACAGAACCATGAG

Paste this into a BLAST search page for me
GATCCGAGACGTGTTCAACGACAGAGAGGACATTATCGAGCTGCAGGATGTGAGTCCTATACCATCTTTGCGAAGATCGGCACCGAGACCATGAATCTAGTAACTCGTAATTATGGCACCGGACAGACATAGCCAGCTTAGACGTCGCGCACGCATGTTGCACGCCCTGAAGAGAAGAGGTGCCTCTGCTATTAAGGCAAAATACTCCCGAATGATATTTCCGATATTTCCGATCAGTTTTCTTGCGTTCTCTTGCGTTCAATCTTGGCTACTGGTGGCTACTGGCTGTTTTATATTCTGGTGAACGAGTAATTAATTCCCCTAGATTCCCCTAGCAACAGAACCATGAG

Full Affymetrix probeset data:

Annotations for 1623048_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720