FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623089_at:

>probe:Drosophila_2:1623089_at:684:591; Interrogation_Position=156; Antisense; TGGTCCTTGCGGTTCCTGCTGTAGT
>probe:Drosophila_2:1623089_at:510:621; Interrogation_Position=172; Antisense; TGCTGTAGTCCTTGTGGATCTTGCT
>probe:Drosophila_2:1623089_at:357:725; Interrogation_Position=183; Antisense; TTGTGGATCTTGCTGTGCGCCTTGC
>probe:Drosophila_2:1623089_at:484:49; Interrogation_Position=252; Antisense; ATGCGGGCCTTGTGGACCTTGCTGT
>probe:Drosophila_2:1623089_at:684:553; Interrogation_Position=265; Antisense; GGACCTTGCTGTGGACCTTGTAGGC
>probe:Drosophila_2:1623089_at:535:305; Interrogation_Position=280; Antisense; CCTTGTAGGCCATATTGCGGGTGCT
>probe:Drosophila_2:1623089_at:212:689; Interrogation_Position=292; Antisense; TATTGCGGGTGCTGAACAACAACCA
>probe:Drosophila_2:1623089_at:475:161; Interrogation_Position=326; Antisense; AAATATCTTTTTCCTGTGAACCACA
>probe:Drosophila_2:1623089_at:637:519; Interrogation_Position=353; Antisense; GTGGAACTTAGGACTGAATGCGGAT
>probe:Drosophila_2:1623089_at:214:623; Interrogation_Position=371; Antisense; TGCGGATAAACTCTTCTTAGCTCGC
>probe:Drosophila_2:1623089_at:7:673; Interrogation_Position=388; Antisense; TAGCTCGCGGGCCTAGTCAATAAAA
>probe:Drosophila_2:1623089_at:347:561; Interrogation_Position=73; Antisense; GGAACCATCATGTGTTGCGGACCCC
>probe:Drosophila_2:1623089_at:111:715; Interrogation_Position=87; Antisense; TTGCGGACCCCTTGGATTCTGCGGA
>probe:Drosophila_2:1623089_at:650:729; Interrogation_Position=98; Antisense; TTGGATTCTGCGGACCCTGTAGCCC

Paste this into a BLAST search page for me
TGGTCCTTGCGGTTCCTGCTGTAGTTGCTGTAGTCCTTGTGGATCTTGCTTTGTGGATCTTGCTGTGCGCCTTGCATGCGGGCCTTGTGGACCTTGCTGTGGACCTTGCTGTGGACCTTGTAGGCCCTTGTAGGCCATATTGCGGGTGCTTATTGCGGGTGCTGAACAACAACCAAAATATCTTTTTCCTGTGAACCACAGTGGAACTTAGGACTGAATGCGGATTGCGGATAAACTCTTCTTAGCTCGCTAGCTCGCGGGCCTAGTCAATAAAAGGAACCATCATGTGTTGCGGACCCCTTGCGGACCCCTTGGATTCTGCGGATTGGATTCTGCGGACCCTGTAGCCC

Full Affymetrix probeset data:

Annotations for 1623089_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720