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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623164_a_at:

>probe:Drosophila_2:1623164_a_at:11:473; Interrogation_Position=3958; Antisense; GTTCGGGATCGAACAGCGCCACGCC
>probe:Drosophila_2:1623164_a_at:142:321; Interrogation_Position=3980; Antisense; GCCCCTGCTGGAACTGCAGGTGGAC
>probe:Drosophila_2:1623164_a_at:271:267; Interrogation_Position=3996; Antisense; CAGGTGGACATTGCTGACTCGGCGC
>probe:Drosophila_2:1623164_a_at:394:607; Interrogation_Position=4010; Antisense; TGACTCGGCGCAGCCTCTCAATTTG
>probe:Drosophila_2:1623164_a_at:561:353; Interrogation_Position=4019; Antisense; GCAGCCTCTCAATTTGTCCAAGAAA
>probe:Drosophila_2:1623164_a_at:362:639; Interrogation_Position=4025; Antisense; TCTCAATTTGTCCAAGAAATCGCCC
>probe:Drosophila_2:1623164_a_at:692:263; Interrogation_Position=4061; Antisense; CAGCAAGCTGCACGCTCTGGTGGCC
>probe:Drosophila_2:1623164_a_at:665:317; Interrogation_Position=4086; Antisense; GCCGCCAATGCCGTTCAAAGGTATC
>probe:Drosophila_2:1623164_a_at:529:473; Interrogation_Position=4098; Antisense; GTTCAAAGGTATCCCACATTGTCCG
>probe:Drosophila_2:1623164_a_at:344:151; Interrogation_Position=4113; Antisense; ACATTGTCCGCCGACGTCACAGTGA
>probe:Drosophila_2:1623164_a_at:154:139; Interrogation_Position=4126; Antisense; ACGTCACAGTGACAGCCTCCAATGG
>probe:Drosophila_2:1623164_a_at:344:85; Interrogation_Position=4133; Antisense; AGTGACAGCCTCCAATGGCGGTCCT
>probe:Drosophila_2:1623164_a_at:448:323; Interrogation_Position=4231; Antisense; GCGCCGCCGTGCACAAGGTAATGCT
>probe:Drosophila_2:1623164_a_at:199:357; Interrogation_Position=4241; Antisense; GCACAAGGTAATGCTGGAGGCGTAA

Paste this into a BLAST search page for me
GTTCGGGATCGAACAGCGCCACGCCGCCCCTGCTGGAACTGCAGGTGGACCAGGTGGACATTGCTGACTCGGCGCTGACTCGGCGCAGCCTCTCAATTTGGCAGCCTCTCAATTTGTCCAAGAAATCTCAATTTGTCCAAGAAATCGCCCCAGCAAGCTGCACGCTCTGGTGGCCGCCGCCAATGCCGTTCAAAGGTATCGTTCAAAGGTATCCCACATTGTCCGACATTGTCCGCCGACGTCACAGTGAACGTCACAGTGACAGCCTCCAATGGAGTGACAGCCTCCAATGGCGGTCCTGCGCCGCCGTGCACAAGGTAATGCTGCACAAGGTAATGCTGGAGGCGTAA

Full Affymetrix probeset data:

Annotations for 1623164_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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