FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623197_a_at:

>probe:Drosophila_2:1623197_a_at:127:563; Interrogation_Position=1408; Antisense; GGAACCCGTCAATGCGCATCTGAGT
>probe:Drosophila_2:1623197_a_at:688:39; Interrogation_Position=1425; Antisense; ATCTGAGTCGCGATGAGCTGGCACA
>probe:Drosophila_2:1623197_a_at:267:127; Interrogation_Position=1455; Antisense; AGCCATTATTCATAACGCCGCTGAA
>probe:Drosophila_2:1623197_a_at:302:349; Interrogation_Position=1546; Antisense; GCAGGTCAACTGGACGCACAACGGC
>probe:Drosophila_2:1623197_a_at:60:355; Interrogation_Position=1561; Antisense; GCACAACGGCGGTCTTTTGGAGTCG
>probe:Drosophila_2:1623197_a_at:378:349; Interrogation_Position=1590; Antisense; GCAGGCACTGCATCGAGTACCGGAA
>probe:Drosophila_2:1623197_a_at:90:71; Interrogation_Position=1641; Antisense; AGGCCTATCCGGATGACAACGGCAG
>probe:Drosophila_2:1623197_a_at:525:329; Interrogation_Position=1697; Antisense; GCGGCCACCACCAGCGGAAATTTGA
>probe:Drosophila_2:1623197_a_at:227:559; Interrogation_Position=1712; Antisense; GGAAATTTGACCGTTTCGAGCACAA
>probe:Drosophila_2:1623197_a_at:155:257; Interrogation_Position=1732; Antisense; CACAAACCGCGGCTTTAGATACTAA
>probe:Drosophila_2:1623197_a_at:228:727; Interrogation_Position=1804; Antisense; TTGTTCAATGCCAAAGTTTCGCCTT
>probe:Drosophila_2:1623197_a_at:19:93; Interrogation_Position=1818; Antisense; AGTTTCGCCTTATTGTGTGTATGTA
>probe:Drosophila_2:1623197_a_at:431:149; Interrogation_Position=1862; Antisense; ACTTATTCGTCTTGTGGGCTGATGA
>probe:Drosophila_2:1623197_a_at:697:59; Interrogation_Position=1899; Antisense; ATGTCGCCCAAAACAACCCATTATA

Paste this into a BLAST search page for me
GGAACCCGTCAATGCGCATCTGAGTATCTGAGTCGCGATGAGCTGGCACAAGCCATTATTCATAACGCCGCTGAAGCAGGTCAACTGGACGCACAACGGCGCACAACGGCGGTCTTTTGGAGTCGGCAGGCACTGCATCGAGTACCGGAAAGGCCTATCCGGATGACAACGGCAGGCGGCCACCACCAGCGGAAATTTGAGGAAATTTGACCGTTTCGAGCACAACACAAACCGCGGCTTTAGATACTAATTGTTCAATGCCAAAGTTTCGCCTTAGTTTCGCCTTATTGTGTGTATGTAACTTATTCGTCTTGTGGGCTGATGAATGTCGCCCAAAACAACCCATTATA

Full Affymetrix probeset data:

Annotations for 1623197_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720