FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623234_s_at:

>probe:Drosophila_2:1623234_s_at:425:357; Interrogation_Position=4807; Antisense; GCAACACTTTCATTAACTCTGACCA
>probe:Drosophila_2:1623234_s_at:217:169; Interrogation_Position=4837; Antisense; AAAGGCGGCACTACTTACTAGCGAT
>probe:Drosophila_2:1623234_s_at:74:669; Interrogation_Position=4852; Antisense; TACTAGCGATTAGCTGTTAGCGATT
>probe:Drosophila_2:1623234_s_at:709:705; Interrogation_Position=4868; Antisense; TTAGCGATTAGCCAGAAAGACCATC
>probe:Drosophila_2:1623234_s_at:108:393; Interrogation_Position=4882; Antisense; GAAAGACCATCAGTGTGTCCACACT
>probe:Drosophila_2:1623234_s_at:570:517; Interrogation_Position=4894; Antisense; GTGTGTCCACACTGCACTATGAAGA
>probe:Drosophila_2:1623234_s_at:533:375; Interrogation_Position=4914; Antisense; GAAGAACTACACGTACTACCAGTGA
>probe:Drosophila_2:1623234_s_at:661:127; Interrogation_Position=4931; Antisense; ACCAGTGAGCACTAATCAATTTACT
>probe:Drosophila_2:1623234_s_at:248:211; Interrogation_Position=4962; Antisense; AAGACTTTCTATTCGCTTACGTCGC
>probe:Drosophila_2:1623234_s_at:17:635; Interrogation_Position=4974; Antisense; TCGCTTACGTCGCTGGTATCGAAGT
>probe:Drosophila_2:1623234_s_at:227:493; Interrogation_Position=5081; Antisense; GTAACGAGCAGGTACATATTTTTTG
>probe:Drosophila_2:1623234_s_at:87:385; Interrogation_Position=5231; Antisense; GAACTCGTTGAGAAAACTGCGCCAA
>probe:Drosophila_2:1623234_s_at:548:175; Interrogation_Position=5244; Antisense; AAACTGCGCCAAATTTAGACGTAAT
>probe:Drosophila_2:1623234_s_at:548:685; Interrogation_Position=5349; Antisense; TATACTGTCAACGTTTACTGCTAGA

Paste this into a BLAST search page for me
GCAACACTTTCATTAACTCTGACCAAAAGGCGGCACTACTTACTAGCGATTACTAGCGATTAGCTGTTAGCGATTTTAGCGATTAGCCAGAAAGACCATCGAAAGACCATCAGTGTGTCCACACTGTGTGTCCACACTGCACTATGAAGAGAAGAACTACACGTACTACCAGTGAACCAGTGAGCACTAATCAATTTACTAAGACTTTCTATTCGCTTACGTCGCTCGCTTACGTCGCTGGTATCGAAGTGTAACGAGCAGGTACATATTTTTTGGAACTCGTTGAGAAAACTGCGCCAAAAACTGCGCCAAATTTAGACGTAATTATACTGTCAACGTTTACTGCTAGA

Full Affymetrix probeset data:

Annotations for 1623234_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720