FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623241_s_at:

>probe:Drosophila_2:1623241_s_at:316:687; Interrogation_Position=1384; Antisense; TTAGAGCATGGAGCTGCCCTGAGAG
>probe:Drosophila_2:1623241_s_at:605:215; Interrogation_Position=1412; Antisense; AAGATTCGGACGGTGGCTTCCTGCA
>probe:Drosophila_2:1623241_s_at:90:621; Interrogation_Position=1441; Antisense; TCCGGAATCCGTGTGGTTTTCAATT
>probe:Drosophila_2:1623241_s_at:312:263; Interrogation_Position=1483; Antisense; CAGCGAGTGGTTTCCGTGCAGGTTC
>probe:Drosophila_2:1623241_s_at:690:431; Interrogation_Position=1523; Antisense; GAGTGCCCACCTATAGTGATCTGAA
>probe:Drosophila_2:1623241_s_at:100:457; Interrogation_Position=1549; Antisense; GATACTGCCATCTACAATGTCGTCC
>probe:Drosophila_2:1623241_s_at:589:247; Interrogation_Position=1563; Antisense; CAATGTCGTCCTGGGAGAGTTCCTG
>probe:Drosophila_2:1623241_s_at:267:101; Interrogation_Position=1578; Antisense; AGAGTTCCTGCTAGATGGTGGCGAT
>probe:Drosophila_2:1623241_s_at:262:597; Interrogation_Position=1608; Antisense; TGTAATGAGGGACTCAGCCCACCAA
>probe:Drosophila_2:1623241_s_at:541:637; Interrogation_Position=1658; Antisense; TCGAGGCGGTATCCCAATATCTGAA
>probe:Drosophila_2:1623241_s_at:306:39; Interrogation_Position=1676; Antisense; ATCTGAACCAGCGTGACTATGTCTA
>probe:Drosophila_2:1623241_s_at:47:513; Interrogation_Position=1688; Antisense; GTGACTATGTCTATCCCGAGATCGA
>probe:Drosophila_2:1623241_s_at:46:47; Interrogation_Position=1737; Antisense; ATCCAGTACACTTATGGGCTCGGCA
>probe:Drosophila_2:1623241_s_at:151:715; Interrogation_Position=1769; Antisense; TTCTTATCTCTTCCCTTCTGATAAA

Paste this into a BLAST search page for me
TTAGAGCATGGAGCTGCCCTGAGAGAAGATTCGGACGGTGGCTTCCTGCATCCGGAATCCGTGTGGTTTTCAATTCAGCGAGTGGTTTCCGTGCAGGTTCGAGTGCCCACCTATAGTGATCTGAAGATACTGCCATCTACAATGTCGTCCCAATGTCGTCCTGGGAGAGTTCCTGAGAGTTCCTGCTAGATGGTGGCGATTGTAATGAGGGACTCAGCCCACCAATCGAGGCGGTATCCCAATATCTGAAATCTGAACCAGCGTGACTATGTCTAGTGACTATGTCTATCCCGAGATCGAATCCAGTACACTTATGGGCTCGGCATTCTTATCTCTTCCCTTCTGATAAA

Full Affymetrix probeset data:

Annotations for 1623241_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720