FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623252_a_at:

>probe:Drosophila_2:1623252_a_at:525:373; Interrogation_Position=1924; Antisense; GAAGAGCAACCAAATACGAACCAAT
>probe:Drosophila_2:1623252_a_at:478:107; Interrogation_Position=1970; Antisense; AGAAAACTGCAACACACTGCAACTG
>probe:Drosophila_2:1623252_a_at:683:705; Interrogation_Position=2047; Antisense; TTAACGAAGGGCAACCGACAAGCAA
>probe:Drosophila_2:1623252_a_at:157:357; Interrogation_Position=2057; Antisense; GCAACCGACAAGCAACCACTTAATT
>probe:Drosophila_2:1623252_a_at:98:687; Interrogation_Position=2148; Antisense; TATATATATAGGGACAGGCAGAGAG
>probe:Drosophila_2:1623252_a_at:116:421; Interrogation_Position=2168; Antisense; GAGAGAGTAAAATGTTTGCGCCTAT
>probe:Drosophila_2:1623252_a_at:513:59; Interrogation_Position=2179; Antisense; ATGTTTGCGCCTATTGTTTATGTTC
>probe:Drosophila_2:1623252_a_at:297:691; Interrogation_Position=2190; Antisense; TATTGTTTATGTTCAGCATTTCCCC
>probe:Drosophila_2:1623252_a_at:479:309; Interrogation_Position=2228; Antisense; CCACGATACCCACTCTTTATTAAGT
>probe:Drosophila_2:1623252_a_at:221:457; Interrogation_Position=2232; Antisense; GATACCCACTCTTTATTAAGTTTGT
>probe:Drosophila_2:1623252_a_at:508:19; Interrogation_Position=2264; Antisense; ATATTTTGTTCATCTTAGCCGATCG
>probe:Drosophila_2:1623252_a_at:151:675; Interrogation_Position=2279; Antisense; TAGCCGATCGATGGACTAACCACGA
>probe:Drosophila_2:1623252_a_at:672:279; Interrogation_Position=2294; Antisense; CTAACCACGACACGACCTTAATGAT
>probe:Drosophila_2:1623252_a_at:186:381; Interrogation_Position=2302; Antisense; GACACGACCTTAATGATTTATCCCC

Paste this into a BLAST search page for me
GAAGAGCAACCAAATACGAACCAATAGAAAACTGCAACACACTGCAACTGTTAACGAAGGGCAACCGACAAGCAAGCAACCGACAAGCAACCACTTAATTTATATATATAGGGACAGGCAGAGAGGAGAGAGTAAAATGTTTGCGCCTATATGTTTGCGCCTATTGTTTATGTTCTATTGTTTATGTTCAGCATTTCCCCCCACGATACCCACTCTTTATTAAGTGATACCCACTCTTTATTAAGTTTGTATATTTTGTTCATCTTAGCCGATCGTAGCCGATCGATGGACTAACCACGACTAACCACGACACGACCTTAATGATGACACGACCTTAATGATTTATCCCC

Full Affymetrix probeset data:

Annotations for 1623252_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720