FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623268_a_at:

>probe:Drosophila_2:1623268_a_at:365:579; Interrogation_Position=1039; Antisense; GGCCACTCCTGGCTACTATGAAATA
>probe:Drosophila_2:1623268_a_at:616:277; Interrogation_Position=1054; Antisense; CTATGAAATAGTGCGCGCCGGCGTG
>probe:Drosophila_2:1623268_a_at:613:203; Interrogation_Position=1085; Antisense; AAGCCGACACTCAGCCTCATGGAGG
>probe:Drosophila_2:1623268_a_at:702:75; Interrogation_Position=1107; Antisense; AGGAGTTCGGCATTCGGGAGCTAAA
>probe:Drosophila_2:1623268_a_at:462:419; Interrogation_Position=1147; Antisense; GAGCTATTCCTTTGGCTTTAACTTT
>probe:Drosophila_2:1623268_a_at:563:585; Interrogation_Position=1183; Antisense; TGGAACATCCTACTTTGCTTTGCAT
>probe:Drosophila_2:1623268_a_at:77:693; Interrogation_Position=1196; Antisense; TTTGCTTTGCATGCGGGAACACAAC
>probe:Drosophila_2:1623268_a_at:569:39; Interrogation_Position=665; Antisense; ATCTGCGTTCACAACATCGATGCGT
>probe:Drosophila_2:1623268_a_at:616:469; Interrogation_Position=688; Antisense; GTTGCGACGCTTTGGTCAGGCTGCC
>probe:Drosophila_2:1623268_a_at:632:609; Interrogation_Position=756; Antisense; TGACCATCGTGATCGAGCGGACGTC
>probe:Drosophila_2:1623268_a_at:495:589; Interrogation_Position=786; Antisense; TGAGCAACCGTTTCCTTAATCCCAG
>probe:Drosophila_2:1623268_a_at:730:183; Interrogation_Position=818; Antisense; AAAATCGGCATACGCATTCCGGACT
>probe:Drosophila_2:1623268_a_at:594:717; Interrogation_Position=834; Antisense; TTCCGGACTTCAACTTCATGCGCGA
>probe:Drosophila_2:1623268_a_at:228:717; Interrogation_Position=977; Antisense; TTCGATGCCGGTCGAATCGGTCTGA

Paste this into a BLAST search page for me
GGCCACTCCTGGCTACTATGAAATACTATGAAATAGTGCGCGCCGGCGTGAAGCCGACACTCAGCCTCATGGAGGAGGAGTTCGGCATTCGGGAGCTAAAGAGCTATTCCTTTGGCTTTAACTTTTGGAACATCCTACTTTGCTTTGCATTTTGCTTTGCATGCGGGAACACAACATCTGCGTTCACAACATCGATGCGTGTTGCGACGCTTTGGTCAGGCTGCCTGACCATCGTGATCGAGCGGACGTCTGAGCAACCGTTTCCTTAATCCCAGAAAATCGGCATACGCATTCCGGACTTTCCGGACTTCAACTTCATGCGCGATTCGATGCCGGTCGAATCGGTCTGA

Full Affymetrix probeset data:

Annotations for 1623268_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720