FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623274_s_at:

>probe:Drosophila_2:1623274_s_at:485:661; Interrogation_Position=1384; Antisense; TAAACAAATTTTCGTAGTCGCCAAT
>probe:Drosophila_2:1623274_s_at:651:243; Interrogation_Position=1406; Antisense; AATTTTTCGTTGAGAGCTGCCCTGA
>probe:Drosophila_2:1623274_s_at:407:425; Interrogation_Position=1417; Antisense; GAGAGCTGCCCTGAATAATAAAATC
>probe:Drosophila_2:1623274_s_at:610:185; Interrogation_Position=1529; Antisense; AACAATACCACGCTATATGCTATAT
>probe:Drosophila_2:1623274_s_at:619:51; Interrogation_Position=1545; Antisense; ATGCTATATATGTATGCCCCTCAAC
>probe:Drosophila_2:1623274_s_at:635:45; Interrogation_Position=1558; Antisense; ATGCCCCTCAACTCTGATCGAACTG
>probe:Drosophila_2:1623274_s_at:127:113; Interrogation_Position=1587; Antisense; AGCAGCCGCACTCTTAGTTTATAAT
>probe:Drosophila_2:1623274_s_at:34:17; Interrogation_Position=1656; Antisense; ATTTATGCTAAGTTCGGAGCTTTAG
>probe:Drosophila_2:1623274_s_at:224:553; Interrogation_Position=1671; Antisense; GGAGCTTTAGTTTTTGGCCACACAC
>probe:Drosophila_2:1623274_s_at:714:705; Interrogation_Position=1730; Antisense; TTAGTTGAATGCCATAGCGAGGGAA
>probe:Drosophila_2:1623274_s_at:608:275; Interrogation_Position=1779; Antisense; CTTCGATTTCTTTTGATTGGACTCA
>probe:Drosophila_2:1623274_s_at:14:465; Interrogation_Position=1793; Antisense; GATTGGACTCATTTTATTTTCGGTT
>probe:Drosophila_2:1623274_s_at:583:687; Interrogation_Position=1807; Antisense; TATTTTCGGTTTTGCTTGCTGTAAA
>probe:Drosophila_2:1623274_s_at:630:485; Interrogation_Position=1857; Antisense; GTAGTTGGCACAATCACTTTGCTTA

Paste this into a BLAST search page for me
TAAACAAATTTTCGTAGTCGCCAATAATTTTTCGTTGAGAGCTGCCCTGAGAGAGCTGCCCTGAATAATAAAATCAACAATACCACGCTATATGCTATATATGCTATATATGTATGCCCCTCAACATGCCCCTCAACTCTGATCGAACTGAGCAGCCGCACTCTTAGTTTATAATATTTATGCTAAGTTCGGAGCTTTAGGGAGCTTTAGTTTTTGGCCACACACTTAGTTGAATGCCATAGCGAGGGAACTTCGATTTCTTTTGATTGGACTCAGATTGGACTCATTTTATTTTCGGTTTATTTTCGGTTTTGCTTGCTGTAAAGTAGTTGGCACAATCACTTTGCTTA

Full Affymetrix probeset data:

Annotations for 1623274_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720