FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623306_at:

>probe:Drosophila_2:1623306_at:196:335; Interrogation_Position=373; Antisense; GCTGCAGATCCGCTTCAACATGAAG
>probe:Drosophila_2:1623306_at:708:423; Interrogation_Position=428; Antisense; GAGACGCCGGACATAGCCAACCTGC
>probe:Drosophila_2:1623306_at:165:697; Interrogation_Position=479; Antisense; TTTCTCTGCGGCTTCGAGGTGGACG
>probe:Drosophila_2:1623306_at:241:593; Interrogation_Position=519; Antisense; TGCGTCTGGAGGACCTGTTCGTCGA
>probe:Drosophila_2:1623306_at:383:413; Interrogation_Position=530; Antisense; GACCTGTTCGTCGAGTCGTTCGAAA
>probe:Drosophila_2:1623306_at:466:139; Interrogation_Position=561; Antisense; ACGTGAAGACGCTGCGCGGCGACCA
>probe:Drosophila_2:1623306_at:465:353; Interrogation_Position=627; Antisense; GCACCAAATTCACCATCGAGAACGT
>probe:Drosophila_2:1623306_at:156:635; Interrogation_Position=642; Antisense; TCGAGAACGTGACCAAGACCCGCAT
>probe:Drosophila_2:1623306_at:322:103; Interrogation_Position=657; Antisense; AGACCCGCATCGTGCTAGCCGATAG
>probe:Drosophila_2:1623306_at:387:125; Interrogation_Position=673; Antisense; AGCCGATAGCAAGATCCACATCCTG
>probe:Drosophila_2:1623306_at:246:631; Interrogation_Position=693; Antisense; TCCTGGGCAGCTACCAGAACATTCA
>probe:Drosophila_2:1623306_at:607:107; Interrogation_Position=708; Antisense; AGAACATTCAGCTTGCGCGCCGGGC
>probe:Drosophila_2:1623306_at:241:299; Interrogation_Position=759; Antisense; CGCCCAGCAAGGTGTATGGCAACCT
>probe:Drosophila_2:1623306_at:16:601; Interrogation_Position=771; Antisense; TGTATGGCAACCTGCGGGCAGTCGC

Paste this into a BLAST search page for me
GCTGCAGATCCGCTTCAACATGAAGGAGACGCCGGACATAGCCAACCTGCTTTCTCTGCGGCTTCGAGGTGGACGTGCGTCTGGAGGACCTGTTCGTCGAGACCTGTTCGTCGAGTCGTTCGAAAACGTGAAGACGCTGCGCGGCGACCAGCACCAAATTCACCATCGAGAACGTTCGAGAACGTGACCAAGACCCGCATAGACCCGCATCGTGCTAGCCGATAGAGCCGATAGCAAGATCCACATCCTGTCCTGGGCAGCTACCAGAACATTCAAGAACATTCAGCTTGCGCGCCGGGCCGCCCAGCAAGGTGTATGGCAACCTTGTATGGCAACCTGCGGGCAGTCGC

Full Affymetrix probeset data:

Annotations for 1623306_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720