FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623312_s_at:

>probe:Drosophila_2:1623312_s_at:499:667; Interrogation_Position=1002; Antisense; TACTCGAATTACCTCATCCATGTTG
>probe:Drosophila_2:1623312_s_at:631:45; Interrogation_Position=1017; Antisense; ATCCATGTTGTGTGCGGGTAGGCCT
>probe:Drosophila_2:1623312_s_at:100:531; Interrogation_Position=1032; Antisense; GGGTAGGCCTTCCATGGACTCATGC
>probe:Drosophila_2:1623312_s_at:425:437; Interrogation_Position=1070; Antisense; GAGGACCGCTGTTGCTATCCAATGG
>probe:Drosophila_2:1623312_s_at:651:473; Interrogation_Position=1096; Antisense; GTTAAGTATTTCATCGTCGGCATTG
>probe:Drosophila_2:1623312_s_at:108:47; Interrogation_Position=1154; Antisense; ATCCGGGTGTTTACTCCAGAGTGAG
>probe:Drosophila_2:1623312_s_at:582:239; Interrogation_Position=1213; Antisense; AATACCTGCCTGTGTTCATAGTCAA
>probe:Drosophila_2:1623312_s_at:544:137; Interrogation_Position=1254; Antisense; ACGACCTTATTTATTGCCTAGCTTA
>probe:Drosophila_2:1623312_s_at:562:313; Interrogation_Position=1269; Antisense; GCCTAGCTTAGTCCGTTTTAATGCA
>probe:Drosophila_2:1623312_s_at:87:357; Interrogation_Position=1291; Antisense; GCAAAGTGTCTTTGTTACTCCACCA
>probe:Drosophila_2:1623312_s_at:239:161; Interrogation_Position=755; Antisense; ACAAGAGCTTTGACCCCGATACATA
>probe:Drosophila_2:1623312_s_at:674:149; Interrogation_Position=804; Antisense; ACTTCGCAAGCCTATATCGTTTTCT
>probe:Drosophila_2:1623312_s_at:701:13; Interrogation_Position=832; Antisense; ATTATAAAGCCAATCTGCCTACCGC
>probe:Drosophila_2:1623312_s_at:251:473; Interrogation_Position=949; Antisense; GTTAAGGTGCCAATCATGTCCATCA

Paste this into a BLAST search page for me
TACTCGAATTACCTCATCCATGTTGATCCATGTTGTGTGCGGGTAGGCCTGGGTAGGCCTTCCATGGACTCATGCGAGGACCGCTGTTGCTATCCAATGGGTTAAGTATTTCATCGTCGGCATTGATCCGGGTGTTTACTCCAGAGTGAGAATACCTGCCTGTGTTCATAGTCAAACGACCTTATTTATTGCCTAGCTTAGCCTAGCTTAGTCCGTTTTAATGCAGCAAAGTGTCTTTGTTACTCCACCAACAAGAGCTTTGACCCCGATACATAACTTCGCAAGCCTATATCGTTTTCTATTATAAAGCCAATCTGCCTACCGCGTTAAGGTGCCAATCATGTCCATCA

Full Affymetrix probeset data:

Annotations for 1623312_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720