FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623323_at:

>probe:Drosophila_2:1623323_at:432:51; Interrogation_Position=1059; Antisense; ATGCGCATTCGCTTTGATCAGCTGC
>probe:Drosophila_2:1623323_at:394:453; Interrogation_Position=1074; Antisense; GATCAGCTGCAGTTTGTCCTATGGC
>probe:Drosophila_2:1623323_at:548:581; Interrogation_Position=563; Antisense; TGGCCTATGTTCTGTTGCTGCTCAA
>probe:Drosophila_2:1623323_at:239:73; Interrogation_Position=596; Antisense; AGGCACTGCGTCTGAATGGCCAGCA
>probe:Drosophila_2:1623323_at:110:433; Interrogation_Position=692; Antisense; GAGTGCATCGCATGTTCGCCTGGCT
>probe:Drosophila_2:1623323_at:155:523; Interrogation_Position=718; Antisense; GTGGCCATAGCCTTAATATATCTGG
>probe:Drosophila_2:1623323_at:586:479; Interrogation_Position=742; Antisense; GTGTTTTTCAACACGGCCACCATTT
>probe:Drosophila_2:1623323_at:429:473; Interrogation_Position=783; Antisense; GTTCATTCAGAAGCACGACGCCTTG
>probe:Drosophila_2:1623323_at:55:69; Interrogation_Position=822; Antisense; AGGCTTGAAGATGCTGCTCACGGTC
>probe:Drosophila_2:1623323_at:463:499; Interrogation_Position=847; Antisense; GTCTCCTTTTTGGTCATCCTATGGG
>probe:Drosophila_2:1623323_at:387:47; Interrogation_Position=862; Antisense; ATCCTATGGGACGTCGTGCTACTGC
>probe:Drosophila_2:1623323_at:694:507; Interrogation_Position=877; Antisense; GTGCTACTGCAGGTCATCTGTGAAA
>probe:Drosophila_2:1623323_at:677:61; Interrogation_Position=944; Antisense; ATGTGGCCTCTTCCAGGACGACTTA
>probe:Drosophila_2:1623323_at:309:419; Interrogation_Position=998; Antisense; GAGCTATTACACGATCATCGCCGGA

Paste this into a BLAST search page for me
ATGCGCATTCGCTTTGATCAGCTGCGATCAGCTGCAGTTTGTCCTATGGCTGGCCTATGTTCTGTTGCTGCTCAAAGGCACTGCGTCTGAATGGCCAGCAGAGTGCATCGCATGTTCGCCTGGCTGTGGCCATAGCCTTAATATATCTGGGTGTTTTTCAACACGGCCACCATTTGTTCATTCAGAAGCACGACGCCTTGAGGCTTGAAGATGCTGCTCACGGTCGTCTCCTTTTTGGTCATCCTATGGGATCCTATGGGACGTCGTGCTACTGCGTGCTACTGCAGGTCATCTGTGAAAATGTGGCCTCTTCCAGGACGACTTAGAGCTATTACACGATCATCGCCGGA

Full Affymetrix probeset data:

Annotations for 1623323_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720