FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623383_at:

>probe:Drosophila_2:1623383_at:602:551; Interrogation_Position=13831; Antisense; GGACTCAAATTACAGGGCGCCCAGT
>probe:Drosophila_2:1623383_at:344:385; Interrogation_Position=13860; Antisense; GAACAATGAATTGCTCCTGGCTTCC
>probe:Drosophila_2:1623383_at:259:685; Interrogation_Position=13887; Antisense; TATCATGATGGATCTACCTGTCACC
>probe:Drosophila_2:1623383_at:516:673; Interrogation_Position=13901; Antisense; TACCTGTCACCATTCTCAAGTGGAT
>probe:Drosophila_2:1623383_at:471:29; Interrogation_Position=13924; Antisense; ATAAAGATTTCCTCGGAGCCACGCA
>probe:Drosophila_2:1623383_at:114:415; Interrogation_Position=13939; Antisense; GAGCCACGCATCAGCAAGTTGACAT
>probe:Drosophila_2:1623383_at:264:403; Interrogation_Position=13959; Antisense; GACATTGCCGGTTTACTTGAACTCC
>probe:Drosophila_2:1623383_at:544:613; Interrogation_Position=13976; Antisense; TGAACTCCACGCGTACAGAACTACT
>probe:Drosophila_2:1623383_at:534:381; Interrogation_Position=13993; Antisense; GAACTACTCTTCACTGTTGACTTGG
>probe:Drosophila_2:1623383_at:627:523; Interrogation_Position=14029; Antisense; GGGCAGGAATCGCATAGCTTCTACG
>probe:Drosophila_2:1623383_at:69:101; Interrogation_Position=14056; Antisense; AGAGGCGTGGCAGTTTTGACCTCCA
>probe:Drosophila_2:1623383_at:164:413; Interrogation_Position=14073; Antisense; GACCTCCACGGCCTTGAACTAAGTG
>probe:Drosophila_2:1623383_at:461:341; Interrogation_Position=14188; Antisense; GCTATATTCGTACTCTTTTCATTCA
>probe:Drosophila_2:1623383_at:475:601; Interrogation_Position=14342; Antisense; TGTTCCCCATTTCCGATAAAGCTTA

Paste this into a BLAST search page for me
GGACTCAAATTACAGGGCGCCCAGTGAACAATGAATTGCTCCTGGCTTCCTATCATGATGGATCTACCTGTCACCTACCTGTCACCATTCTCAAGTGGATATAAAGATTTCCTCGGAGCCACGCAGAGCCACGCATCAGCAAGTTGACATGACATTGCCGGTTTACTTGAACTCCTGAACTCCACGCGTACAGAACTACTGAACTACTCTTCACTGTTGACTTGGGGGCAGGAATCGCATAGCTTCTACGAGAGGCGTGGCAGTTTTGACCTCCAGACCTCCACGGCCTTGAACTAAGTGGCTATATTCGTACTCTTTTCATTCATGTTCCCCATTTCCGATAAAGCTTA

Full Affymetrix probeset data:

Annotations for 1623383_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720