FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623386_s_at:

>probe:Drosophila_2:1623386_s_at:90:337; Interrogation_Position=10029; Antisense; GCTAGACGCTGAGCTAATGGCCAAG
>probe:Drosophila_2:1623386_s_at:164:219; Interrogation_Position=10093; Antisense; AAGTCGACCGGCGTTCAGATGCAGA
>probe:Drosophila_2:1623386_s_at:562:175; Interrogation_Position=10141; Antisense; AAACCTGTGTCGTTGTTGCGGATCA
>probe:Drosophila_2:1623386_s_at:32:135; Interrogation_Position=10180; Antisense; ACGCTTAATCCTGGCGAATTGCTCC
>probe:Drosophila_2:1623386_s_at:415:631; Interrogation_Position=10278; Antisense; TCCTGCGGCAGGTTCTGTGTTCAAC
>probe:Drosophila_2:1623386_s_at:355:603; Interrogation_Position=10295; Antisense; TGTTCAACCTGTTCAAGCGCCGCAA
>probe:Drosophila_2:1623386_s_at:624:19; Interrogation_Position=9776; Antisense; ATATGGTGGACCACTACAGCCGCTT
>probe:Drosophila_2:1623386_s_at:683:261; Interrogation_Position=9829; Antisense; CAGCCGGGTGGTTTCGATGAGTACA
>probe:Drosophila_2:1623386_s_at:474:443; Interrogation_Position=9844; Antisense; GATGAGTACATCCAGCACTGCTATA
>probe:Drosophila_2:1623386_s_at:161:131; Interrogation_Position=9868; Antisense; ACCTACCACCGGGACGATATCAAAT
>probe:Drosophila_2:1623386_s_at:704:13; Interrogation_Position=9884; Antisense; ATATCAAATCCTTCCGGGACGTGCA
>probe:Drosophila_2:1623386_s_at:730:139; Interrogation_Position=9902; Antisense; ACGTGCACACGTTTAGCGATCTGAA
>probe:Drosophila_2:1623386_s_at:28:497; Interrogation_Position=9938; Antisense; GTCAGGTGCATTACCAATTCCAGAA
>probe:Drosophila_2:1623386_s_at:295:115; Interrogation_Position=9982; Antisense; AGCAGTCTCCGTTATACACGTTACA

Paste this into a BLAST search page for me
GCTAGACGCTGAGCTAATGGCCAAGAAGTCGACCGGCGTTCAGATGCAGAAAACCTGTGTCGTTGTTGCGGATCAACGCTTAATCCTGGCGAATTGCTCCTCCTGCGGCAGGTTCTGTGTTCAACTGTTCAACCTGTTCAAGCGCCGCAAATATGGTGGACCACTACAGCCGCTTCAGCCGGGTGGTTTCGATGAGTACAGATGAGTACATCCAGCACTGCTATAACCTACCACCGGGACGATATCAAATATATCAAATCCTTCCGGGACGTGCAACGTGCACACGTTTAGCGATCTGAAGTCAGGTGCATTACCAATTCCAGAAAGCAGTCTCCGTTATACACGTTACA

Full Affymetrix probeset data:

Annotations for 1623386_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720