FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623401_a_at:

>probe:Drosophila_2:1623401_a_at:195:685; Interrogation_Position=1705; Antisense; TATCGTTGCTATCTCGCCAGATGAT
>probe:Drosophila_2:1623401_a_at:411:443; Interrogation_Position=1724; Antisense; GATGATTCAACAATTCCTCGACGAG
>probe:Drosophila_2:1623401_a_at:496:7; Interrogation_Position=1736; Antisense; ATTCCTCGACGAGTTGGTATGGCGA
>probe:Drosophila_2:1623401_a_at:299:485; Interrogation_Position=1752; Antisense; GTATGGCGAGAGTCCTTTGGTACAT
>probe:Drosophila_2:1623401_a_at:721:503; Interrogation_Position=1763; Antisense; GTCCTTTGGTACATATGCCTTGCAG
>probe:Drosophila_2:1623401_a_at:233:315; Interrogation_Position=1779; Antisense; GCCTTGCAGGCATTCAACAATATCA
>probe:Drosophila_2:1623401_a_at:484:23; Interrogation_Position=1798; Antisense; ATATCATAATACACATTGCCGAGCA
>probe:Drosophila_2:1623401_a_at:224:421; Interrogation_Position=1818; Antisense; GAGCAGACAAGAGTAACCACCAATG
>probe:Drosophila_2:1623401_a_at:715:231; Interrogation_Position=1839; Antisense; AATGAGACAATCACTCAGCGTCTGT
>probe:Drosophila_2:1623401_a_at:269:145; Interrogation_Position=1851; Antisense; ACTCAGCGTCTGTATCAGGTGGCAA
>probe:Drosophila_2:1623401_a_at:453:79; Interrogation_Position=1867; Antisense; AGGTGGCAACCAATCCGTTCAAGGA
>probe:Drosophila_2:1623401_a_at:102:75; Interrogation_Position=1888; Antisense; AGGACTGGAGTATTTTGCCGGCCAA
>probe:Drosophila_2:1623401_a_at:659:693; Interrogation_Position=1901; Antisense; TTTGCCGGCCAACTACAAGGAGACA
>probe:Drosophila_2:1623401_a_at:373:225; Interrogation_Position=1917; Antisense; AAGGAGACACCTGCCAATGCTGCTC

Paste this into a BLAST search page for me
TATCGTTGCTATCTCGCCAGATGATGATGATTCAACAATTCCTCGACGAGATTCCTCGACGAGTTGGTATGGCGAGTATGGCGAGAGTCCTTTGGTACATGTCCTTTGGTACATATGCCTTGCAGGCCTTGCAGGCATTCAACAATATCAATATCATAATACACATTGCCGAGCAGAGCAGACAAGAGTAACCACCAATGAATGAGACAATCACTCAGCGTCTGTACTCAGCGTCTGTATCAGGTGGCAAAGGTGGCAACCAATCCGTTCAAGGAAGGACTGGAGTATTTTGCCGGCCAATTTGCCGGCCAACTACAAGGAGACAAAGGAGACACCTGCCAATGCTGCTC

Full Affymetrix probeset data:

Annotations for 1623401_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720