FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623403_s_at:

>probe:Drosophila_2:1623403_s_at:721:179; Interrogation_Position=1692; Antisense; AAACAAGCAAGCAACGGCATCATCA
>probe:Drosophila_2:1623403_s_at:372:253; Interrogation_Position=1703; Antisense; CAACGGCATCATCAGCAGGGCATAT
>probe:Drosophila_2:1623403_s_at:555:569; Interrogation_Position=1721; Antisense; GGCATATAAAATGATACCCCAGCAA
>probe:Drosophila_2:1623403_s_at:148:673; Interrogation_Position=1735; Antisense; TACCCCAGCAAATGTGATTCACGAG
>probe:Drosophila_2:1623403_s_at:328:293; Interrogation_Position=1756; Antisense; CGAGTGAATCACTGCGATCGATAAT
>probe:Drosophila_2:1623403_s_at:471:615; Interrogation_Position=1826; Antisense; TGCAATCCATACACAAATCAACATA
>probe:Drosophila_2:1623403_s_at:204:191; Interrogation_Position=1845; Antisense; AACATACTTGCATAACACACCCACA
>probe:Drosophila_2:1623403_s_at:598:47; Interrogation_Position=1903; Antisense; ATCCACCCACTCAAAAAGCAAACAT
>probe:Drosophila_2:1623403_s_at:607:209; Interrogation_Position=1918; Antisense; AAGCAAACATCATTGCCCAAAAGGG
>probe:Drosophila_2:1623403_s_at:424:97; Interrogation_Position=1985; Antisense; AGAAATCAACAACACTTAGCCTAAT
>probe:Drosophila_2:1623403_s_at:476:491; Interrogation_Position=2055; Antisense; GTAATGCTGAGGAAACTAAACCTAT
>probe:Drosophila_2:1623403_s_at:18:493; Interrogation_Position=2102; Antisense; GTAAGCGAATAAACACAACACCATA
>probe:Drosophila_2:1623403_s_at:377:345; Interrogation_Position=2134; Antisense; GCATATACCCATTTGATTCACGTCA
>probe:Drosophila_2:1623403_s_at:309:235; Interrogation_Position=2159; Antisense; AATCGAATCCAATGCTTAATTATGA

Paste this into a BLAST search page for me
AAACAAGCAAGCAACGGCATCATCACAACGGCATCATCAGCAGGGCATATGGCATATAAAATGATACCCCAGCAATACCCCAGCAAATGTGATTCACGAGCGAGTGAATCACTGCGATCGATAATTGCAATCCATACACAAATCAACATAAACATACTTGCATAACACACCCACAATCCACCCACTCAAAAAGCAAACATAAGCAAACATCATTGCCCAAAAGGGAGAAATCAACAACACTTAGCCTAATGTAATGCTGAGGAAACTAAACCTATGTAAGCGAATAAACACAACACCATAGCATATACCCATTTGATTCACGTCAAATCGAATCCAATGCTTAATTATGA

Full Affymetrix probeset data:

Annotations for 1623403_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720