FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623408_s_at:

>probe:Drosophila_2:1623408_s_at:156:161; Interrogation_Position=1508; Antisense; AACGGGCGACAATGGAGAAAATTCA
>probe:Drosophila_2:1623408_s_at:314:729; Interrogation_Position=1601; Antisense; TTGGAGATGCTGGAGACGCTTCTTC
>probe:Drosophila_2:1623408_s_at:145:551; Interrogation_Position=1612; Antisense; GGAGACGCTTCTTCACATATTATTG
>probe:Drosophila_2:1623408_s_at:420:387; Interrogation_Position=1636; Antisense; GAAAAGCATACTTGCGGCCATTAAA
>probe:Drosophila_2:1623408_s_at:486:651; Interrogation_Position=1707; Antisense; TCACATTTGCAGTTCACAGGTAAAT
>probe:Drosophila_2:1623408_s_at:585:133; Interrogation_Position=1772; Antisense; ACGTCAAGTCAGATTCAAGGGTGCC
>probe:Drosophila_2:1623408_s_at:578:709; Interrogation_Position=1785; Antisense; TTCAAGGGTGCCGATCGATCTAGTT
>probe:Drosophila_2:1623408_s_at:27:507; Interrogation_Position=1792; Antisense; GTGCCGATCGATCTAGTTGAACTAA
>probe:Drosophila_2:1623408_s_at:452:367; Interrogation_Position=1810; Antisense; GAACTAAAGCTCGAGAAACAACCAA
>probe:Drosophila_2:1623408_s_at:725:673; Interrogation_Position=1867; Antisense; TATTAGCCTAAATTACCGAGAACGA
>probe:Drosophila_2:1623408_s_at:230:193; Interrogation_Position=1904; Antisense; AACTAATCGCATCATTTGGTCAAAC
>probe:Drosophila_2:1623408_s_at:189:173; Interrogation_Position=1991; Antisense; AAAGCAATCGCCCATTCATTCACAC
>probe:Drosophila_2:1623408_s_at:479:11; Interrogation_Position=2004; Antisense; ATTCATTCACACACTCATTCACACA
>probe:Drosophila_2:1623408_s_at:100:647; Interrogation_Position=2030; Antisense; TCATTCACACACTCATTCAACCAGT

Paste this into a BLAST search page for me
AACGGGCGACAATGGAGAAAATTCATTGGAGATGCTGGAGACGCTTCTTCGGAGACGCTTCTTCACATATTATTGGAAAAGCATACTTGCGGCCATTAAATCACATTTGCAGTTCACAGGTAAATACGTCAAGTCAGATTCAAGGGTGCCTTCAAGGGTGCCGATCGATCTAGTTGTGCCGATCGATCTAGTTGAACTAAGAACTAAAGCTCGAGAAACAACCAATATTAGCCTAAATTACCGAGAACGAAACTAATCGCATCATTTGGTCAAACAAAGCAATCGCCCATTCATTCACACATTCATTCACACACTCATTCACACATCATTCACACACTCATTCAACCAGT

Full Affymetrix probeset data:

Annotations for 1623408_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720