FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623412_a_at:

>probe:Drosophila_2:1623412_a_at:288:151; Interrogation_Position=2359; Antisense; ACATTGTGGGCGATGTCCTGCTGGC
>probe:Drosophila_2:1623412_a_at:134:289; Interrogation_Position=2387; Antisense; CGGTTGCACTGCTTACTTGGGCTAT
>probe:Drosophila_2:1623412_a_at:245:273; Interrogation_Position=2402; Antisense; CTTGGGCTATTTCACGACGGAGTAC
>probe:Drosophila_2:1623412_a_at:467:677; Interrogation_Position=2440; Antisense; TAGACGACTGGAATGCCCTGTGCAA
>probe:Drosophila_2:1623412_a_at:415:251; Interrogation_Position=2462; Antisense; CAAGCGCAAGCACATTCCGAGTAGT
>probe:Drosophila_2:1623412_a_at:47:497; Interrogation_Position=2515; Antisense; GTCATCCAATGACCATTCGTGCTTG
>probe:Drosophila_2:1623412_a_at:459:693; Interrogation_Position=2552; Antisense; TTTGCCCGCGGATAACTTTTCAGTG
>probe:Drosophila_2:1623412_a_at:651:83; Interrogation_Position=2591; Antisense; AGTGACCAATTCCAGTCGTTACTCG
>probe:Drosophila_2:1623412_a_at:117:219; Interrogation_Position=2772; Antisense; AAGTACTGGAGCTAGCCATCACCTT
>probe:Drosophila_2:1623412_a_at:642:729; Interrogation_Position=2796; Antisense; TTGGCCAGCCTGTGCTCATCGAGAA
>probe:Drosophila_2:1623412_a_at:562:517; Interrogation_Position=2822; Antisense; GTGGGTGAAAAGCTCGACTCGAACT
>probe:Drosophila_2:1623412_a_at:337:385; Interrogation_Position=2842; Antisense; GAACTTGACGCCCATTCTGGAGAAG
>probe:Drosophila_2:1623412_a_at:126:113; Interrogation_Position=2877; Antisense; AGCACAAGGGCGGTCTGTTTATCAA
>probe:Drosophila_2:1623412_a_at:507:601; Interrogation_Position=2892; Antisense; TGTTTATCAAGAGCGGCGACCAAAT

Paste this into a BLAST search page for me
ACATTGTGGGCGATGTCCTGCTGGCCGGTTGCACTGCTTACTTGGGCTATCTTGGGCTATTTCACGACGGAGTACTAGACGACTGGAATGCCCTGTGCAACAAGCGCAAGCACATTCCGAGTAGTGTCATCCAATGACCATTCGTGCTTGTTTGCCCGCGGATAACTTTTCAGTGAGTGACCAATTCCAGTCGTTACTCGAAGTACTGGAGCTAGCCATCACCTTTTGGCCAGCCTGTGCTCATCGAGAAGTGGGTGAAAAGCTCGACTCGAACTGAACTTGACGCCCATTCTGGAGAAGAGCACAAGGGCGGTCTGTTTATCAATGTTTATCAAGAGCGGCGACCAAAT

Full Affymetrix probeset data:

Annotations for 1623412_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720