FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623446_a_at:

>probe:Drosophila_2:1623446_a_at:701:183; Interrogation_Position=1017; Antisense; AAAATCATACTTACATCGCGAACTT
>probe:Drosophila_2:1623446_a_at:563:709; Interrogation_Position=1043; Antisense; TTAAATGCGCTTTTACAAGGCTGTA
>probe:Drosophila_2:1623446_a_at:442:491; Interrogation_Position=1096; Antisense; GTACAACTACGCAGCTTCAACTATA
>probe:Drosophila_2:1623446_a_at:271:231; Interrogation_Position=1204; Antisense; AATGTCCTTAAATTCGTGTCCTCTC
>probe:Drosophila_2:1623446_a_at:282:695; Interrogation_Position=1231; Antisense; TTTCAGCCATGTCCGGTCGGGACTA
>probe:Drosophila_2:1623446_a_at:493:385; Interrogation_Position=1251; Antisense; GACTACAACGGAGAGCCAGGCTGTC
>probe:Drosophila_2:1623446_a_at:281:269; Interrogation_Position=1267; Antisense; CAGGCTGTCGCAGTGCCGAGGAACT
>probe:Drosophila_2:1623446_a_at:535:559; Interrogation_Position=1286; Antisense; GGAACTGGGCCAGAGCTACCGGCAT
>probe:Drosophila_2:1623446_a_at:720:101; Interrogation_Position=1297; Antisense; AGAGCTACCGGCATTTCTGGGATCC
>probe:Drosophila_2:1623446_a_at:59:317; Interrogation_Position=1326; Antisense; GCCTACTGGCAGTGCGGCGGAAAAT
>probe:Drosophila_2:1623446_a_at:407:253; Interrogation_Position=1424; Antisense; CAACGAGCTGTTCTACGACCGGGAG
>probe:Drosophila_2:1623446_a_at:143:583; Interrogation_Position=1473; Antisense; TGGCAGTGGACCGAACCGCAGGATC
>probe:Drosophila_2:1623446_a_at:318:301; Interrogation_Position=943; Antisense; CCGCACTTTTCTGTTTGTTTGTTGA
>probe:Drosophila_2:1623446_a_at:137:17; Interrogation_Position=991; Antisense; ATATTTGCGTATGCTACGAGTGCAA

Paste this into a BLAST search page for me
AAAATCATACTTACATCGCGAACTTTTAAATGCGCTTTTACAAGGCTGTAGTACAACTACGCAGCTTCAACTATAAATGTCCTTAAATTCGTGTCCTCTCTTTCAGCCATGTCCGGTCGGGACTAGACTACAACGGAGAGCCAGGCTGTCCAGGCTGTCGCAGTGCCGAGGAACTGGAACTGGGCCAGAGCTACCGGCATAGAGCTACCGGCATTTCTGGGATCCGCCTACTGGCAGTGCGGCGGAAAATCAACGAGCTGTTCTACGACCGGGAGTGGCAGTGGACCGAACCGCAGGATCCCGCACTTTTCTGTTTGTTTGTTGAATATTTGCGTATGCTACGAGTGCAA

Full Affymetrix probeset data:

Annotations for 1623446_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720