FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623484_at:

>probe:Drosophila_2:1623484_at:329:585; Interrogation_Position=3231; Antisense; TGGAAGATCTAAGGACACCCCGGAT
>probe:Drosophila_2:1623484_at:170:559; Interrogation_Position=3243; Antisense; GGACACCCCGGATCGAATACAATGT
>probe:Drosophila_2:1623484_at:568:633; Interrogation_Position=3255; Antisense; TCGAATACAATGTGCGACTTTGGGT
>probe:Drosophila_2:1623484_at:82:537; Interrogation_Position=3277; Antisense; GGTCGGGATTTTGAGAGCGCTTCTT
>probe:Drosophila_2:1623484_at:435:417; Interrogation_Position=3291; Antisense; GAGCGCTTCTTAAGCAAAACTGCAG
>probe:Drosophila_2:1623484_at:18:183; Interrogation_Position=3306; Antisense; AAAACTGCAGTGTCTGTGTTTCTGT
>probe:Drosophila_2:1623484_at:628:515; Interrogation_Position=3315; Antisense; GTGTCTGTGTTTCTGTGTGAGCAAA
>probe:Drosophila_2:1623484_at:633:157; Interrogation_Position=3435; Antisense; ACAAACGATTTTTCGCGCATTCGAG
>probe:Drosophila_2:1623484_at:78:697; Interrogation_Position=3445; Antisense; TTTCGCGCATTCGAGACCATTTTTT
>probe:Drosophila_2:1623484_at:150:479; Interrogation_Position=3492; Antisense; GTTTAGCATCCCATATCAGCAATTT
>probe:Drosophila_2:1623484_at:274:537; Interrogation_Position=3581; Antisense; GGTATTCGTAATCAGCGTTGGTAAC
>probe:Drosophila_2:1623484_at:508:243; Interrogation_Position=3617; Antisense; AATATTTCTTGTATAGTTAACGCGA
>probe:Drosophila_2:1623484_at:71:473; Interrogation_Position=3632; Antisense; GTTAACGCGAACTTTGACATAAACT
>probe:Drosophila_2:1623484_at:558:661; Interrogation_Position=3690; Antisense; TAAACTTCGATTTTTGCAAACTTCA

Paste this into a BLAST search page for me
TGGAAGATCTAAGGACACCCCGGATGGACACCCCGGATCGAATACAATGTTCGAATACAATGTGCGACTTTGGGTGGTCGGGATTTTGAGAGCGCTTCTTGAGCGCTTCTTAAGCAAAACTGCAGAAAACTGCAGTGTCTGTGTTTCTGTGTGTCTGTGTTTCTGTGTGAGCAAAACAAACGATTTTTCGCGCATTCGAGTTTCGCGCATTCGAGACCATTTTTTGTTTAGCATCCCATATCAGCAATTTGGTATTCGTAATCAGCGTTGGTAACAATATTTCTTGTATAGTTAACGCGAGTTAACGCGAACTTTGACATAAACTTAAACTTCGATTTTTGCAAACTTCA

Full Affymetrix probeset data:

Annotations for 1623484_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720