FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623486_at:

>probe:Drosophila_2:1623486_at:607:451; Interrogation_Position=1056; Antisense; GATCTTTGAACTTATGCGACGCACA
>probe:Drosophila_2:1623486_at:623:521; Interrogation_Position=1082; Antisense; GGGCCTTTATGTCGCAATCGAAGAT
>probe:Drosophila_2:1623486_at:34:447; Interrogation_Position=1165; Antisense; GATAACGGAGTGCTTCTGTTTCCCA
>probe:Drosophila_2:1623486_at:232:341; Interrogation_Position=1176; Antisense; GCTTCTGTTTCCCACTTTGAATTTA
>probe:Drosophila_2:1623486_at:83:693; Interrogation_Position=1191; Antisense; TTTGAATTTACCTGCTCCGAGACAC
>probe:Drosophila_2:1623486_at:545:423; Interrogation_Position=1209; Antisense; GAGACACAAGTGGTCCATCCTATCA
>probe:Drosophila_2:1623486_at:576:329; Interrogation_Position=1241; Antisense; GCGTGGACTATACCCTGATGTTTAA
>probe:Drosophila_2:1623486_at:437:601; Interrogation_Position=1259; Antisense; TGTTTAATGTTCTTGGACTGCCCGT
>probe:Drosophila_2:1623486_at:189:557; Interrogation_Position=1315; Antisense; GGACTTCCCATTGGGCTTTCTGTGA
>probe:Drosophila_2:1623486_at:569:163; Interrogation_Position=1350; Antisense; AAATCAGGATCGGTTGTGCCTCCGA
>probe:Drosophila_2:1623486_at:633:291; Interrogation_Position=1419; Antisense; CGTGCCGCACGACCTGGATGACTAG
>probe:Drosophila_2:1623486_at:256:211; Interrogation_Position=850; Antisense; AAGACCCTCGGCTTGAACGTGAAGA
>probe:Drosophila_2:1623486_at:401:511; Interrogation_Position=877; Antisense; GTGAAACTACCCAATCTCGAGAATT
>probe:Drosophila_2:1623486_at:295:67; Interrogation_Position=910; Antisense; ATGGCTTTATCTGGGATCGCCGGAC

Paste this into a BLAST search page for me
GATCTTTGAACTTATGCGACGCACAGGGCCTTTATGTCGCAATCGAAGATGATAACGGAGTGCTTCTGTTTCCCAGCTTCTGTTTCCCACTTTGAATTTATTTGAATTTACCTGCTCCGAGACACGAGACACAAGTGGTCCATCCTATCAGCGTGGACTATACCCTGATGTTTAATGTTTAATGTTCTTGGACTGCCCGTGGACTTCCCATTGGGCTTTCTGTGAAAATCAGGATCGGTTGTGCCTCCGACGTGCCGCACGACCTGGATGACTAGAAGACCCTCGGCTTGAACGTGAAGAGTGAAACTACCCAATCTCGAGAATTATGGCTTTATCTGGGATCGCCGGAC

Full Affymetrix probeset data:

Annotations for 1623486_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720