FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623516_s_at:

>probe:Drosophila_2:1623516_s_at:81:179; Interrogation_Position=1388; Antisense; AAACTCCAGCGAACACAGCTTTCTG
>probe:Drosophila_2:1623516_s_at:266:155; Interrogation_Position=1402; Antisense; ACAGCTTTCTGCCAGTTTTGGTAAA
>probe:Drosophila_2:1623516_s_at:645:439; Interrogation_Position=1451; Antisense; GATGGTAATGTTTGCCTTGTCCAAC
>probe:Drosophila_2:1623516_s_at:467:29; Interrogation_Position=1491; Antisense; ATACTACTTATAATGGCGCCTAAAC
>probe:Drosophila_2:1623516_s_at:73:183; Interrogation_Position=1531; Antisense; AAAAGGAGCTGGCTTCGTCGATAAT
>probe:Drosophila_2:1623516_s_at:662:275; Interrogation_Position=1543; Antisense; CTTCGTCGATAATGGCAGCTGCTTT
>probe:Drosophila_2:1623516_s_at:569:283; Interrogation_Position=1561; Antisense; CTGCTTTGAGCTGTGGCATGGCTGT
>probe:Drosophila_2:1623516_s_at:200:349; Interrogation_Position=1576; Antisense; GCATGGCTGTGGGATCACTGCTCAG
>probe:Drosophila_2:1623516_s_at:460:259; Interrogation_Position=1591; Antisense; CACTGCTCAGCCTTGTATTTGTTCA
>probe:Drosophila_2:1623516_s_at:132:241; Interrogation_Position=1638; Antisense; AATAAGTCTGCCCATAGTGCCTTCG
>probe:Drosophila_2:1623516_s_at:200:507; Interrogation_Position=1654; Antisense; GTGCCTTCGGGAGTTTCAGAATCTT
>probe:Drosophila_2:1623516_s_at:143:3; Interrogation_Position=1706; Antisense; ATTGGTTGCTCTTCCAACTACTTAG
>probe:Drosophila_2:1623516_s_at:398:445; Interrogation_Position=1847; Antisense; GATGCTGTGTGTTGTTTTCCAAATT
>probe:Drosophila_2:1623516_s_at:463:157; Interrogation_Position=1891; Antisense; ACAAGTTTACTATATCGGGATGCCT

Paste this into a BLAST search page for me
AAACTCCAGCGAACACAGCTTTCTGACAGCTTTCTGCCAGTTTTGGTAAAGATGGTAATGTTTGCCTTGTCCAACATACTACTTATAATGGCGCCTAAACAAAAGGAGCTGGCTTCGTCGATAATCTTCGTCGATAATGGCAGCTGCTTTCTGCTTTGAGCTGTGGCATGGCTGTGCATGGCTGTGGGATCACTGCTCAGCACTGCTCAGCCTTGTATTTGTTCAAATAAGTCTGCCCATAGTGCCTTCGGTGCCTTCGGGAGTTTCAGAATCTTATTGGTTGCTCTTCCAACTACTTAGGATGCTGTGTGTTGTTTTCCAAATTACAAGTTTACTATATCGGGATGCCT

Full Affymetrix probeset data:

Annotations for 1623516_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720