FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623560_at:

>probe:Drosophila_2:1623560_at:248:277; Interrogation_Position=1055; Antisense; CTACGTGGGACGCAAGTTTCTTCAG
>probe:Drosophila_2:1623560_at:172:585; Interrogation_Position=1091; Antisense; TGGACCACGGGAGTTCGTTATCCTA
>probe:Drosophila_2:1623560_at:51:71; Interrogation_Position=1171; Antisense; AGGCCATGGAATCGGCTGACTTTCA
>probe:Drosophila_2:1623560_at:544:611; Interrogation_Position=1187; Antisense; TGACTTTCAGCTCACCGAGACGAAC
>probe:Drosophila_2:1623560_at:427:727; Interrogation_Position=1246; Antisense; TTGGCCAACAGTGCAAGCGGGTTCT
>probe:Drosophila_2:1623560_at:523:81; Interrogation_Position=1261; Antisense; AGCGGGTTCTGGATTATGGACGACT
>probe:Drosophila_2:1623560_at:661:587; Interrogation_Position=1285; Antisense; TGGAGCATCTACGATCCCACGGATA
>probe:Drosophila_2:1623560_at:237:149; Interrogation_Position=1319; Antisense; ACTTAAGTTCTATGTTCCCAGGGAT
>probe:Drosophila_2:1623560_at:280:47; Interrogation_Position=858; Antisense; ATCCGTGCTGATATCGCTGATCTTA
>probe:Drosophila_2:1623560_at:471:605; Interrogation_Position=875; Antisense; TGATCTTAAGCTTTCTGCTCTGCCG
>probe:Drosophila_2:1623560_at:398:381; Interrogation_Position=919; Antisense; GAACGGTGGCTTTTTCGAAGCACCT
>probe:Drosophila_2:1623560_at:483:377; Interrogation_Position=935; Antisense; GAAGCACCTCTGTGGAGCAGCTACA
>probe:Drosophila_2:1623560_at:711:351; Interrogation_Position=951; Antisense; GCAGCTACAGACTTGACCCTGAGAT
>probe:Drosophila_2:1623560_at:546:585; Interrogation_Position=989; Antisense; TGGAAATGCCAGCTCGGACTACGTT

Paste this into a BLAST search page for me
CTACGTGGGACGCAAGTTTCTTCAGTGGACCACGGGAGTTCGTTATCCTAAGGCCATGGAATCGGCTGACTTTCATGACTTTCAGCTCACCGAGACGAACTTGGCCAACAGTGCAAGCGGGTTCTAGCGGGTTCTGGATTATGGACGACTTGGAGCATCTACGATCCCACGGATAACTTAAGTTCTATGTTCCCAGGGATATCCGTGCTGATATCGCTGATCTTATGATCTTAAGCTTTCTGCTCTGCCGGAACGGTGGCTTTTTCGAAGCACCTGAAGCACCTCTGTGGAGCAGCTACAGCAGCTACAGACTTGACCCTGAGATTGGAAATGCCAGCTCGGACTACGTT

Full Affymetrix probeset data:

Annotations for 1623560_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720