FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623569_at:

>probe:Drosophila_2:1623569_at:229:639; Interrogation_Position=173; Antisense; TCGTGGTTCTTCATGTGTTTGCGGA
>probe:Drosophila_2:1623569_at:542:547; Interrogation_Position=195; Antisense; GGATGATATCGGTGCGCTAGACAAA
>probe:Drosophila_2:1623569_at:593:63; Interrogation_Position=227; Antisense; ATGTGGTATACCGACTAGCTGCCCC
>probe:Drosophila_2:1623569_at:509:699; Interrogation_Position=278; Antisense; TTTTCGTGGACGATCTGTGGCAGTC
>probe:Drosophila_2:1623569_at:84:595; Interrogation_Position=293; Antisense; TGTGGCAGTCGTTCATCTTCAATGA
>probe:Drosophila_2:1623569_at:653:55; Interrogation_Position=320; Antisense; ATGACTTCAGCTTCTCTCGGAGTGA
>probe:Drosophila_2:1623569_at:494:441; Interrogation_Position=350; Antisense; GATGTACAGTGGACTCATTTCCCCT
>probe:Drosophila_2:1623569_at:266:695; Interrogation_Position=367; Antisense; TTTCCCCTGATATACGCCGCAAATT
>probe:Drosophila_2:1623569_at:278:177; Interrogation_Position=433; Antisense; AAACTGCCCGACCTGGAGAGTCTAA
>probe:Drosophila_2:1623569_at:202:125; Interrogation_Position=497; Antisense; AGCCCACTGCTAGAGATCCCAAGGT
>probe:Drosophila_2:1623569_at:628:381; Interrogation_Position=546; Antisense; GAACGAACTTATGTACGCCAGTGAT
>probe:Drosophila_2:1623569_at:611:675; Interrogation_Position=578; Antisense; TAGCGATTTGCTTCTACAACTCCTT
>probe:Drosophila_2:1623569_at:683:159; Interrogation_Position=593; Antisense; ACAACTCCTTGCAAAATGGCGCTGA
>probe:Drosophila_2:1623569_at:578:357; Interrogation_Position=637; Antisense; GCAAATCTGGATTGGCTGGCCGATA

Paste this into a BLAST search page for me
TCGTGGTTCTTCATGTGTTTGCGGAGGATGATATCGGTGCGCTAGACAAAATGTGGTATACCGACTAGCTGCCCCTTTTCGTGGACGATCTGTGGCAGTCTGTGGCAGTCGTTCATCTTCAATGAATGACTTCAGCTTCTCTCGGAGTGAGATGTACAGTGGACTCATTTCCCCTTTTCCCCTGATATACGCCGCAAATTAAACTGCCCGACCTGGAGAGTCTAAAGCCCACTGCTAGAGATCCCAAGGTGAACGAACTTATGTACGCCAGTGATTAGCGATTTGCTTCTACAACTCCTTACAACTCCTTGCAAAATGGCGCTGAGCAAATCTGGATTGGCTGGCCGATA

Full Affymetrix probeset data:

Annotations for 1623569_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720