FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623571_a_at:

>probe:Drosophila_2:1623571_a_at:466:361; Interrogation_Position=1027; Antisense; GAATTGCAACGTGCCTACGACAAGC
>probe:Drosophila_2:1623571_a_at:72:251; Interrogation_Position=1078; Antisense; CAACATTCGCCGGATGCGGACATTG
>probe:Drosophila_2:1623571_a_at:248:599; Interrogation_Position=1101; Antisense; TGTCGGCGGCATTCCAGGACTGAAA
>probe:Drosophila_2:1623571_a_at:209:567; Interrogation_Position=1211; Antisense; GGCAGTACGTAAATCCCGAGTATCT
>probe:Drosophila_2:1623571_a_at:526:303; Interrogation_Position=1226; Antisense; CCGAGTATCTGAACGTGCGGGCCAA
>probe:Drosophila_2:1623571_a_at:686:141; Interrogation_Position=1258; Antisense; ACGGCGCACGCCAACAATTAAGGAG
>probe:Drosophila_2:1623571_a_at:719:213; Interrogation_Position=1273; Antisense; AATTAAGGAGCAGCCCACTCGGATA
>probe:Drosophila_2:1623571_a_at:188:45; Interrogation_Position=1304; Antisense; ATCCTGTAATCCTCAGCCTATTTAA
>probe:Drosophila_2:1623571_a_at:393:491; Interrogation_Position=1341; Antisense; GTAAGAGACCTAACCAAATTATGTG
>probe:Drosophila_2:1623571_a_at:649:473; Interrogation_Position=1389; Antisense; GTTAACTTTGTGAGCGGTTTTCATT
>probe:Drosophila_2:1623571_a_at:214:59; Interrogation_Position=1455; Antisense; ATGTACACCTAGACTAAGCCATTTA
>probe:Drosophila_2:1623571_a_at:327:477; Interrogation_Position=1483; Antisense; GTTTAGTTTGTTAGTCCTTATCTCT
>probe:Drosophila_2:1623571_a_at:91:281; Interrogation_Position=1511; Antisense; CTAAGTTGAAGCTTTCTTGCGCTAA
>probe:Drosophila_2:1623571_a_at:517:275; Interrogation_Position=1526; Antisense; CTTGCGCTAAATTCGTTGTGTATAA

Paste this into a BLAST search page for me
GAATTGCAACGTGCCTACGACAAGCCAACATTCGCCGGATGCGGACATTGTGTCGGCGGCATTCCAGGACTGAAAGGCAGTACGTAAATCCCGAGTATCTCCGAGTATCTGAACGTGCGGGCCAAACGGCGCACGCCAACAATTAAGGAGAATTAAGGAGCAGCCCACTCGGATAATCCTGTAATCCTCAGCCTATTTAAGTAAGAGACCTAACCAAATTATGTGGTTAACTTTGTGAGCGGTTTTCATTATGTACACCTAGACTAAGCCATTTAGTTTAGTTTGTTAGTCCTTATCTCTCTAAGTTGAAGCTTTCTTGCGCTAACTTGCGCTAAATTCGTTGTGTATAA

Full Affymetrix probeset data:

Annotations for 1623571_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720