FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623573_s_at:

>probe:Drosophila_2:1623573_s_at:234:637; Interrogation_Position=1638; Antisense; TCGATAGCCACACAGTGCTTCATAC
>probe:Drosophila_2:1623573_s_at:552:247; Interrogation_Position=1667; Antisense; CAATATGTTTGATCCGCGTACCGAG
>probe:Drosophila_2:1623573_s_at:72:487; Interrogation_Position=1684; Antisense; GTACCGAGACAAATCCTACCTGGGA
>probe:Drosophila_2:1623573_s_at:309:29; Interrogation_Position=1696; Antisense; ATCCTACCTGGGACGTTGAGATCCG
>probe:Drosophila_2:1623573_s_at:50:725; Interrogation_Position=1711; Antisense; TTGAGATCCGCGACGATGTGCTGGA
>probe:Drosophila_2:1623573_s_at:573:531; Interrogation_Position=1756; Antisense; GGGTGCTGCACATCCACGTGGACAC
>probe:Drosophila_2:1623573_s_at:446:585; Interrogation_Position=1774; Antisense; TGGACACCATTTCGCACACGGGAAC
>probe:Drosophila_2:1623573_s_at:48:133; Interrogation_Position=1797; Antisense; ACCGTGTATGTCAAGTGCCCGAGCA
>probe:Drosophila_2:1623573_s_at:211:199; Interrogation_Position=1823; Antisense; AACGACCGCAGTGCTGGCAGTGAAT
>probe:Drosophila_2:1623573_s_at:105:369; Interrogation_Position=1844; Antisense; GAATGCACTGCATGGACGCTGGTTT
>probe:Drosophila_2:1623573_s_at:527:333; Interrogation_Position=1861; Antisense; GCTGGTTTGCCGGTCGAGTGATCAC
>probe:Drosophila_2:1623573_s_at:505:671; Interrogation_Position=1893; Antisense; TACGTGCCCGTGATCAACTATCACA
>probe:Drosophila_2:1623573_s_at:295:41; Interrogation_Position=1948; Antisense; ATCTGGTGACGTCCACGCGCAAGAA
>probe:Drosophila_2:1623573_s_at:525:385; Interrogation_Position=1970; Antisense; GAACACCGACGATTGAGCTGAATGC

Paste this into a BLAST search page for me
TCGATAGCCACACAGTGCTTCATACCAATATGTTTGATCCGCGTACCGAGGTACCGAGACAAATCCTACCTGGGAATCCTACCTGGGACGTTGAGATCCGTTGAGATCCGCGACGATGTGCTGGAGGGTGCTGCACATCCACGTGGACACTGGACACCATTTCGCACACGGGAACACCGTGTATGTCAAGTGCCCGAGCAAACGACCGCAGTGCTGGCAGTGAATGAATGCACTGCATGGACGCTGGTTTGCTGGTTTGCCGGTCGAGTGATCACTACGTGCCCGTGATCAACTATCACAATCTGGTGACGTCCACGCGCAAGAAGAACACCGACGATTGAGCTGAATGC

Full Affymetrix probeset data:

Annotations for 1623573_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720