FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623586_a_at:

>probe:Drosophila_2:1623586_a_at:247:315; Interrogation_Position=3400; Antisense; GCCATCGATGGTTGCATTGCTTAGC
>probe:Drosophila_2:1623586_a_at:252:343; Interrogation_Position=3418; Antisense; GCTTAGCGAGTGAGCCATTTGTCAT
>probe:Drosophila_2:1623586_a_at:322:273; Interrogation_Position=3433; Antisense; CATTTGTCATTGCTCTGGTTCCAGA
>probe:Drosophila_2:1623586_a_at:85:119; Interrogation_Position=3506; Antisense; AGCTCTGCGTCATCGGACTATATGC
>probe:Drosophila_2:1623586_a_at:721:435; Interrogation_Position=3557; Antisense; GAGGAGCTGTTTGCGTTACGACCGA
>probe:Drosophila_2:1623586_a_at:654:575; Interrogation_Position=3612; Antisense; GGCGAAGCCAGAATCAACTCTCTTG
>probe:Drosophila_2:1623586_a_at:494:193; Interrogation_Position=3627; Antisense; AACTCTCTTGTCGTTGCTGATGTAT
>probe:Drosophila_2:1623586_a_at:463:333; Interrogation_Position=3642; Antisense; GCTGATGTATTCCACCTGAGACTTA
>probe:Drosophila_2:1623586_a_at:143:609; Interrogation_Position=3658; Antisense; TGAGACTTAGGATGCGACCCTTCCC
>probe:Drosophila_2:1623586_a_at:166:455; Interrogation_Position=3711; Antisense; GATCAACACCACAAGAGCTGCTAGT
>probe:Drosophila_2:1623586_a_at:664:679; Interrogation_Position=3732; Antisense; TAGTGGGATGAACGCAAGCCTCAAT
>probe:Drosophila_2:1623586_a_at:238:67; Interrogation_Position=3773; Antisense; ATGGAGACTTTAGCGCTACAGGCGA
>probe:Drosophila_2:1623586_a_at:640:209; Interrogation_Position=3804; Antisense; AAGCAACCCGACTGTGACTGATTGG
>probe:Drosophila_2:1623586_a_at:94:497; Interrogation_Position=3855; Antisense; GTCATACACCGTCCATATACCAGTA

Paste this into a BLAST search page for me
GCCATCGATGGTTGCATTGCTTAGCGCTTAGCGAGTGAGCCATTTGTCATCATTTGTCATTGCTCTGGTTCCAGAAGCTCTGCGTCATCGGACTATATGCGAGGAGCTGTTTGCGTTACGACCGAGGCGAAGCCAGAATCAACTCTCTTGAACTCTCTTGTCGTTGCTGATGTATGCTGATGTATTCCACCTGAGACTTATGAGACTTAGGATGCGACCCTTCCCGATCAACACCACAAGAGCTGCTAGTTAGTGGGATGAACGCAAGCCTCAATATGGAGACTTTAGCGCTACAGGCGAAAGCAACCCGACTGTGACTGATTGGGTCATACACCGTCCATATACCAGTA

Full Affymetrix probeset data:

Annotations for 1623586_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720