FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623590_s_at:

>probe:Drosophila_2:1623590_s_at:187:577; Interrogation_Position=2208; Antisense; GGCCCAGACAAAGGTATCCATTTAT
>probe:Drosophila_2:1623590_s_at:235:255; Interrogation_Position=2308; Antisense; CAACAGTTGCTGCAGTGCTTAGAAA
>probe:Drosophila_2:1623590_s_at:591:171; Interrogation_Position=2358; Antisense; AAAGAGCGCTATTCAGGGCCTTTGC
>probe:Drosophila_2:1623590_s_at:355:523; Interrogation_Position=2373; Antisense; GGGCCTTTGCCACGGAGAAATTCCA
>probe:Drosophila_2:1623590_s_at:687:25; Interrogation_Position=2446; Antisense; ATAGATTTGCCCGAACTACGAGAGG
>probe:Drosophila_2:1623590_s_at:527:151; Interrogation_Position=2475; Antisense; ACATGACTTTCAGGCACGATTGGAG
>probe:Drosophila_2:1623590_s_at:372:151; Interrogation_Position=2571; Antisense; ACATATTCGACTTGCTCCTCAAAGA
>probe:Drosophila_2:1623590_s_at:702:171; Interrogation_Position=2591; Antisense; AAAGAAGCCACCAAGCACGGCTCGG
>probe:Drosophila_2:1623590_s_at:505:141; Interrogation_Position=2607; Antisense; ACGGCTCGGCTCAGTATTTATTTGT
>probe:Drosophila_2:1623590_s_at:546:185; Interrogation_Position=2632; Antisense; AACACCTAAGTTGCTTCGAGACCTG
>probe:Drosophila_2:1623590_s_at:439:157; Interrogation_Position=2661; Antisense; ACAACGAACATCTCTGTGTTTCCAT
>probe:Drosophila_2:1623590_s_at:237:515; Interrogation_Position=2676; Antisense; GTGTTTCCATTGTTCACAACTCAAA
>probe:Drosophila_2:1623590_s_at:663:479; Interrogation_Position=2705; Antisense; GTTTGCCATGGCATGCAATTCCCGA
>probe:Drosophila_2:1623590_s_at:76:363; Interrogation_Position=2719; Antisense; GCAATTCCCGATGGCTTAGACACTT

Paste this into a BLAST search page for me
GGCCCAGACAAAGGTATCCATTTATCAACAGTTGCTGCAGTGCTTAGAAAAAAGAGCGCTATTCAGGGCCTTTGCGGGCCTTTGCCACGGAGAAATTCCAATAGATTTGCCCGAACTACGAGAGGACATGACTTTCAGGCACGATTGGAGACATATTCGACTTGCTCCTCAAAGAAAAGAAGCCACCAAGCACGGCTCGGACGGCTCGGCTCAGTATTTATTTGTAACACCTAAGTTGCTTCGAGACCTGACAACGAACATCTCTGTGTTTCCATGTGTTTCCATTGTTCACAACTCAAAGTTTGCCATGGCATGCAATTCCCGAGCAATTCCCGATGGCTTAGACACTT

Full Affymetrix probeset data:

Annotations for 1623590_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720