FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623602_a_at:

>probe:Drosophila_2:1623602_a_at:75:35; Interrogation_Position=4577; Antisense; ATCACATAGCCGAGTCAACATTGGA
>probe:Drosophila_2:1623602_a_at:630:317; Interrogation_Position=4585; Antisense; GCCGAGTCAACATTGGATTAAGTTA
>probe:Drosophila_2:1623602_a_at:690:137; Interrogation_Position=4627; Antisense; ACGAGTACAGAATGCACGTGTTGGA
>probe:Drosophila_2:1623602_a_at:148:139; Interrogation_Position=4642; Antisense; ACGTGTTGGAACATCAATGCATCAA
>probe:Drosophila_2:1623602_a_at:529:385; Interrogation_Position=4650; Antisense; GAACATCAATGCATCAAATGTGCTA
>probe:Drosophila_2:1623602_a_at:176:197; Interrogation_Position=4743; Antisense; AACGAATTACGTTTGCCCGACACAT
>probe:Drosophila_2:1623602_a_at:526:291; Interrogation_Position=4752; Antisense; CGTTTGCCCGACACATAATATACAT
>probe:Drosophila_2:1623602_a_at:71:167; Interrogation_Position=4785; Antisense; AAATGTAGTGTATACGTATCGTATT
>probe:Drosophila_2:1623602_a_at:413:57; Interrogation_Position=4892; Antisense; ATGAGCTTGATAAGTGTGGTTTACA
>probe:Drosophila_2:1623602_a_at:615:515; Interrogation_Position=4905; Antisense; GTGTGGTTTACATTCTTTTTGGTTG
>probe:Drosophila_2:1623602_a_at:604:273; Interrogation_Position=4915; Antisense; CATTCTTTTTGGTTGTGTGGATTAA
>probe:Drosophila_2:1623602_a_at:259:547; Interrogation_Position=4932; Antisense; TGGATTAATGGTTTTCGAATTTTCT
>probe:Drosophila_2:1623602_a_at:55:685; Interrogation_Position=5082; Antisense; TATCGTTTTTCCGTATTCCTTTATG
>probe:Drosophila_2:1623602_a_at:401:695; Interrogation_Position=5089; Antisense; TTTCCGTATTCCTTTATGTGTATTG

Paste this into a BLAST search page for me
ATCACATAGCCGAGTCAACATTGGAGCCGAGTCAACATTGGATTAAGTTAACGAGTACAGAATGCACGTGTTGGAACGTGTTGGAACATCAATGCATCAAGAACATCAATGCATCAAATGTGCTAAACGAATTACGTTTGCCCGACACATCGTTTGCCCGACACATAATATACATAAATGTAGTGTATACGTATCGTATTATGAGCTTGATAAGTGTGGTTTACAGTGTGGTTTACATTCTTTTTGGTTGCATTCTTTTTGGTTGTGTGGATTAATGGATTAATGGTTTTCGAATTTTCTTATCGTTTTTCCGTATTCCTTTATGTTTCCGTATTCCTTTATGTGTATTG

Full Affymetrix probeset data:

Annotations for 1623602_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720