FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623605_a_at:

>probe:Drosophila_2:1623605_a_at:176:313; Interrogation_Position=1459; Antisense; GCCAGCAGTTTCACCTTCGGCGGAA
>probe:Drosophila_2:1623605_a_at:686:635; Interrogation_Position=1475; Antisense; TCGGCGGAACCCTGCTTCAAGTGCA
>probe:Drosophila_2:1623605_a_at:536:153; Interrogation_Position=1547; Antisense; ACAGTATCGCCAGCTAAACAGAGAT
>probe:Drosophila_2:1623605_a_at:391:179; Interrogation_Position=1562; Antisense; AAACAGAGATGAATTCCCACCAAAT
>probe:Drosophila_2:1623605_a_at:399:257; Interrogation_Position=1611; Antisense; CAAATTCGAAATGCCTTCTCGCTCT
>probe:Drosophila_2:1623605_a_at:105:283; Interrogation_Position=1628; Antisense; CTCGCTCTCATGTAGCTGGTGTAGA
>probe:Drosophila_2:1623605_a_at:705:677; Interrogation_Position=1665; Antisense; TAGGAGCTAGATCTTGTCACCGTTT
>probe:Drosophila_2:1623605_a_at:333:495; Interrogation_Position=1680; Antisense; GTCACCGTTTTGTGCATATATCAAC
>probe:Drosophila_2:1623605_a_at:458:457; Interrogation_Position=1734; Antisense; GATAGATGCCACTTCTTTCCAGGAG
>probe:Drosophila_2:1623605_a_at:157:159; Interrogation_Position=1760; Antisense; ACACAGCACACTTCTTATCTAAGCG
>probe:Drosophila_2:1623605_a_at:683:641; Interrogation_Position=1804; Antisense; TCTGAATATCCCTAGTGTTTGTACA
>probe:Drosophila_2:1623605_a_at:356:11; Interrogation_Position=1845; Antisense; ATTCGGCGTCCAACATCTGTGATAT
>probe:Drosophila_2:1623605_a_at:612:465; Interrogation_Position=1904; Antisense; GTTGTCAGTGTAATTCTCTTAAGCT
>probe:Drosophila_2:1623605_a_at:532:545; Interrogation_Position=1994; Antisense; GGATCATCGCACGATTCCAATCTCA

Paste this into a BLAST search page for me
GCCAGCAGTTTCACCTTCGGCGGAATCGGCGGAACCCTGCTTCAAGTGCAACAGTATCGCCAGCTAAACAGAGATAAACAGAGATGAATTCCCACCAAATCAAATTCGAAATGCCTTCTCGCTCTCTCGCTCTCATGTAGCTGGTGTAGATAGGAGCTAGATCTTGTCACCGTTTGTCACCGTTTTGTGCATATATCAACGATAGATGCCACTTCTTTCCAGGAGACACAGCACACTTCTTATCTAAGCGTCTGAATATCCCTAGTGTTTGTACAATTCGGCGTCCAACATCTGTGATATGTTGTCAGTGTAATTCTCTTAAGCTGGATCATCGCACGATTCCAATCTCA

Full Affymetrix probeset data:

Annotations for 1623605_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720