FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623643_s_at:

>probe:Drosophila_2:1623643_s_at:123:295; Interrogation_Position=1191; Antisense; CGAGGTCCTAATGCTCCGGTGAAAA
>probe:Drosophila_2:1623643_s_at:687:519; Interrogation_Position=1221; Antisense; GTGGATCCCACCAAACGTTATGGCA
>probe:Drosophila_2:1623643_s_at:133:35; Interrogation_Position=1293; Antisense; ATCAGCTACGATGATCCGGACTCTG
>probe:Drosophila_2:1623643_s_at:198:487; Interrogation_Position=1334; Antisense; GTACGCCAGGGCAAGGAATCTCGGT
>probe:Drosophila_2:1623643_s_at:671:83; Interrogation_Position=1361; Antisense; AGTGGCTCTGTTTGATCTGACCCAA
>probe:Drosophila_2:1623643_s_at:156:409; Interrogation_Position=1386; Antisense; GACGATTTCCGTGGTCAGTGCACAA
>probe:Drosophila_2:1623643_s_at:728:51; Interrogation_Position=1425; Antisense; ATGCTGCGCGCCATCAAGTATCGAC
>probe:Drosophila_2:1623643_s_at:328:213; Interrogation_Position=1440; Antisense; AAGTATCGACTTCTCTAAGCCGACT
>probe:Drosophila_2:1623643_s_at:581:659; Interrogation_Position=1455; Antisense; TAAGCCGACTTCTCTAAGCCAACTT
>probe:Drosophila_2:1623643_s_at:580:659; Interrogation_Position=1469; Antisense; TAAGCCAACTTCTCTAAGCCAACTT
>probe:Drosophila_2:1623643_s_at:442:663; Interrogation_Position=1509; Antisense; TAAAGACATCTCCAGCACGCAAATG
>probe:Drosophila_2:1623643_s_at:590:521; Interrogation_Position=1566; Antisense; GGGAACAAATGTCACCCTTTCGGTG
>probe:Drosophila_2:1623643_s_at:84:663; Interrogation_Position=1593; Antisense; TAAAAGGCCTCCTTCTGTGTCTGTC
>probe:Drosophila_2:1623643_s_at:209:515; Interrogation_Position=1609; Antisense; GTGTCTGTCCCTTTTTGCAAATTAA

Paste this into a BLAST search page for me
CGAGGTCCTAATGCTCCGGTGAAAAGTGGATCCCACCAAACGTTATGGCAATCAGCTACGATGATCCGGACTCTGGTACGCCAGGGCAAGGAATCTCGGTAGTGGCTCTGTTTGATCTGACCCAAGACGATTTCCGTGGTCAGTGCACAAATGCTGCGCGCCATCAAGTATCGACAAGTATCGACTTCTCTAAGCCGACTTAAGCCGACTTCTCTAAGCCAACTTTAAGCCAACTTCTCTAAGCCAACTTTAAAGACATCTCCAGCACGCAAATGGGGAACAAATGTCACCCTTTCGGTGTAAAAGGCCTCCTTCTGTGTCTGTCGTGTCTGTCCCTTTTTGCAAATTAA

Full Affymetrix probeset data:

Annotations for 1623643_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720