FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623656_s_at:

>probe:Drosophila_2:1623656_s_at:619:565; Interrogation_Position=2489; Antisense; GGCAATGGATCCAATGGCTTTAGCA
>probe:Drosophila_2:1623656_s_at:441:571; Interrogation_Position=2504; Antisense; GGCTTTAGCAACAATGGCGCGGAAA
>probe:Drosophila_2:1623656_s_at:662:383; Interrogation_Position=2525; Antisense; GAAAGTTTCAACGACCGGGATCGCG
>probe:Drosophila_2:1623656_s_at:506:521; Interrogation_Position=2574; Antisense; GTGGCATCAACAACTCCGGTCCTGG
>probe:Drosophila_2:1623656_s_at:527:83; Interrogation_Position=2636; Antisense; AGTGGCCGAAATCGCGGTCGCAACA
>probe:Drosophila_2:1623656_s_at:516:153; Interrogation_Position=2664; Antisense; ACAGACGTTACTAATCGCTATCCCA
>probe:Drosophila_2:1623656_s_at:545:187; Interrogation_Position=2691; Antisense; AACACTGTTTTCTGCCAATCTCCTT
>probe:Drosophila_2:1623656_s_at:633:237; Interrogation_Position=2707; Antisense; AATCTCCTTTGCATCTTTTGCTTTG
>probe:Drosophila_2:1623656_s_at:116:141; Interrogation_Position=2796; Antisense; ACGTGTTGTGTGTAATTTTCCGACT
>probe:Drosophila_2:1623656_s_at:508:89; Interrogation_Position=2830; Antisense; AGTTTTTTACAATGGAGTCTCTGGA
>probe:Drosophila_2:1623656_s_at:321:269; Interrogation_Position=2871; Antisense; CATGGATATTTGTTTCTCTAGGAAT
>probe:Drosophila_2:1623656_s_at:174:707; Interrogation_Position=2952; Antisense; TTAGCATTTTAGGTACTGTATTGGC
>probe:Drosophila_2:1623656_s_at:418:567; Interrogation_Position=2974; Antisense; GGCAGTTCTTTTAATTAATTCCGAT
>probe:Drosophila_2:1623656_s_at:584:667; Interrogation_Position=3032; Antisense; TACTTTGCACAAATTCGCTAACTTA

Paste this into a BLAST search page for me
GGCAATGGATCCAATGGCTTTAGCAGGCTTTAGCAACAATGGCGCGGAAAGAAAGTTTCAACGACCGGGATCGCGGTGGCATCAACAACTCCGGTCCTGGAGTGGCCGAAATCGCGGTCGCAACAACAGACGTTACTAATCGCTATCCCAAACACTGTTTTCTGCCAATCTCCTTAATCTCCTTTGCATCTTTTGCTTTGACGTGTTGTGTGTAATTTTCCGACTAGTTTTTTACAATGGAGTCTCTGGACATGGATATTTGTTTCTCTAGGAATTTAGCATTTTAGGTACTGTATTGGCGGCAGTTCTTTTAATTAATTCCGATTACTTTGCACAAATTCGCTAACTTA

Full Affymetrix probeset data:

Annotations for 1623656_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720