FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623689_a_at:

>probe:Drosophila_2:1623689_a_at:21:161; Interrogation_Position=1012; Antisense; AAATCTTAACCTGACCGTAGTGCCG
>probe:Drosophila_2:1623689_a_at:358:673; Interrogation_Position=1029; Antisense; TAGTGCCGAACGCTGAGTGCAACGC
>probe:Drosophila_2:1623689_a_at:585:321; Interrogation_Position=1109; Antisense; GCCCAGGACTACATTCTCAACAGAG
>probe:Drosophila_2:1623689_a_at:212:533; Interrogation_Position=1153; Antisense; GGGTGGACCCCTACAACTGAATTTG
>probe:Drosophila_2:1623689_a_at:610:575; Interrogation_Position=1185; Antisense; GGCGCCGAGGGCATAGAATACACTA
>probe:Drosophila_2:1623689_a_at:416:363; Interrogation_Position=1200; Antisense; GAATACACTATCACCTAATTGGCAT
>probe:Drosophila_2:1623689_a_at:261:653; Interrogation_Position=1215; Antisense; TAATTGGCATCACCTCATACGGCGT
>probe:Drosophila_2:1623689_a_at:209:513; Interrogation_Position=1238; Antisense; GTGTTCTGCCGCAGTAGTTACCCAT
>probe:Drosophila_2:1623689_a_at:318:473; Interrogation_Position=1254; Antisense; GTTACCCATCAGTTTACACCAGAGT
>probe:Drosophila_2:1623689_a_at:343:157; Interrogation_Position=1269; Antisense; ACACCAGAGTGTCTTCTTTCTTGGA
>probe:Drosophila_2:1623689_a_at:352:445; Interrogation_Position=1297; Antisense; GATCGAACTTACTGTTTGGGCCTGA
>probe:Drosophila_2:1623689_a_at:56:729; Interrogation_Position=1312; Antisense; TTGGGCCTGACAGATGCCTACATCA
>probe:Drosophila_2:1623689_a_at:207:563; Interrogation_Position=898; Antisense; GGAATACGTTAGACCTGTCCGCCTG
>probe:Drosophila_2:1623689_a_at:485:611; Interrogation_Position=996; Antisense; TGACGAACCGCCTCACAAATCTTAA

Paste this into a BLAST search page for me
AAATCTTAACCTGACCGTAGTGCCGTAGTGCCGAACGCTGAGTGCAACGCGCCCAGGACTACATTCTCAACAGAGGGGTGGACCCCTACAACTGAATTTGGGCGCCGAGGGCATAGAATACACTAGAATACACTATCACCTAATTGGCATTAATTGGCATCACCTCATACGGCGTGTGTTCTGCCGCAGTAGTTACCCATGTTACCCATCAGTTTACACCAGAGTACACCAGAGTGTCTTCTTTCTTGGAGATCGAACTTACTGTTTGGGCCTGATTGGGCCTGACAGATGCCTACATCAGGAATACGTTAGACCTGTCCGCCTGTGACGAACCGCCTCACAAATCTTAA

Full Affymetrix probeset data:

Annotations for 1623689_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720