FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623698_s_at:

>probe:Drosophila_2:1623698_s_at:576:267; Interrogation_Position=1481; Antisense; CAGTGTAGCCAATTGTCCCATGTGC
>probe:Drosophila_2:1623698_s_at:228:597; Interrogation_Position=1501; Antisense; TGTGCCGCGCAGACATCAAGGGATT
>probe:Drosophila_2:1623698_s_at:530:151; Interrogation_Position=1513; Antisense; ACATCAAGGGATTCGTGCGCACGTT
>probe:Drosophila_2:1623698_s_at:631:137; Interrogation_Position=1533; Antisense; ACGTTCCTTTCGTGAAGTGCATATC
>probe:Drosophila_2:1623698_s_at:405:429; Interrogation_Position=1569; Antisense; GAGTTCACCAGCCTAGTTAGCAGTT
>probe:Drosophila_2:1623698_s_at:337:165; Interrogation_Position=1598; Antisense; AAATCGATTGATTGCACCCACACAA
>probe:Drosophila_2:1623698_s_at:344:237; Interrogation_Position=1666; Antisense; AATCGTCTACTAATCGTCTACTAAG
>probe:Drosophila_2:1623698_s_at:730:471; Interrogation_Position=1681; Antisense; GTCTACTAAGTACTTGGCCAACTGC
>probe:Drosophila_2:1623698_s_at:184:579; Interrogation_Position=1696; Antisense; GGCCAACTGCAGCTATTCGTTTTTA
>probe:Drosophila_2:1623698_s_at:8:193; Interrogation_Position=1751; Antisense; AACTATCGCATTGTGTCCGAGCGCA
>probe:Drosophila_2:1623698_s_at:202:121; Interrogation_Position=1770; Antisense; AGCGCATCCCTTTTGAACCATACAT
>probe:Drosophila_2:1623698_s_at:223:445; Interrogation_Position=1821; Antisense; GATGAGCAGCTCTAATTCGCGCTGA
>probe:Drosophila_2:1623698_s_at:82:223; Interrogation_Position=1847; Antisense; AAGGGTATCAATGCACCGGCACGAC
>probe:Drosophila_2:1623698_s_at:343:25; Interrogation_Position=1942; Antisense; ATAGGCCGCTGATAGTATGGTTTAC

Paste this into a BLAST search page for me
CAGTGTAGCCAATTGTCCCATGTGCTGTGCCGCGCAGACATCAAGGGATTACATCAAGGGATTCGTGCGCACGTTACGTTCCTTTCGTGAAGTGCATATCGAGTTCACCAGCCTAGTTAGCAGTTAAATCGATTGATTGCACCCACACAAAATCGTCTACTAATCGTCTACTAAGGTCTACTAAGTACTTGGCCAACTGCGGCCAACTGCAGCTATTCGTTTTTAAACTATCGCATTGTGTCCGAGCGCAAGCGCATCCCTTTTGAACCATACATGATGAGCAGCTCTAATTCGCGCTGAAAGGGTATCAATGCACCGGCACGACATAGGCCGCTGATAGTATGGTTTAC

Full Affymetrix probeset data:

Annotations for 1623698_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720