FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623699_a_at:

>probe:Drosophila_2:1623699_a_at:673:233; Interrogation_Position=2475; Antisense; AATGCGTCACCAACTGCACCAAATG
>probe:Drosophila_2:1623699_a_at:403:191; Interrogation_Position=2504; Antisense; AACTTCAACTACAGATCCACTACGA
>probe:Drosophila_2:1623699_a_at:628:145; Interrogation_Position=2522; Antisense; ACTACGATCCACCAACTTGATGGCT
>probe:Drosophila_2:1623699_a_at:586:715; Interrogation_Position=2538; Antisense; TTGATGGCTTACACATTCGACAAGA
>probe:Drosophila_2:1623699_a_at:551:565; Interrogation_Position=2652; Antisense; GGAATTACACTTAGGCGCAAACGCA
>probe:Drosophila_2:1623699_a_at:187:359; Interrogation_Position=2668; Antisense; GCAAACGCATGTAACTTTTCTACGA
>probe:Drosophila_2:1623699_a_at:368:149; Interrogation_Position=2681; Antisense; ACTTTTCTACGAGCCATTTGCATAG
>probe:Drosophila_2:1623699_a_at:656:345; Interrogation_Position=2700; Antisense; GCATAGATTTACTGAATTCCACCAT
>probe:Drosophila_2:1623699_a_at:63:719; Interrogation_Position=2716; Antisense; TTCCACCATATATCAATTCAGCTAG
>probe:Drosophila_2:1623699_a_at:62:339; Interrogation_Position=2736; Antisense; GCTAGTTAGTATGACAGCCTATGTA
>probe:Drosophila_2:1623699_a_at:100:315; Interrogation_Position=2752; Antisense; GCCTATGTACGATATGGCCTCGTTT
>probe:Drosophila_2:1623699_a_at:646:245; Interrogation_Position=2826; Antisense; AATTACATGCGTTTGCGTTGCAACA
>probe:Drosophila_2:1623699_a_at:512:343; Interrogation_Position=2903; Antisense; GCATTAGGACTTTCTCACACAACAG
>probe:Drosophila_2:1623699_a_at:614:583; Interrogation_Position=2937; Antisense; TGGAATCACTCCAACCAATTGTAAA

Paste this into a BLAST search page for me
AATGCGTCACCAACTGCACCAAATGAACTTCAACTACAGATCCACTACGAACTACGATCCACCAACTTGATGGCTTTGATGGCTTACACATTCGACAAGAGGAATTACACTTAGGCGCAAACGCAGCAAACGCATGTAACTTTTCTACGAACTTTTCTACGAGCCATTTGCATAGGCATAGATTTACTGAATTCCACCATTTCCACCATATATCAATTCAGCTAGGCTAGTTAGTATGACAGCCTATGTAGCCTATGTACGATATGGCCTCGTTTAATTACATGCGTTTGCGTTGCAACAGCATTAGGACTTTCTCACACAACAGTGGAATCACTCCAACCAATTGTAAA

Full Affymetrix probeset data:

Annotations for 1623699_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720