FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623728_at:

>probe:Drosophila_2:1623728_at:598:291; Interrogation_Position=102; Antisense; CGTGTACGAGAGTTCTTCCGAGGAT
>probe:Drosophila_2:1623728_at:300:451; Interrogation_Position=132; Antisense; GATCGAACCCATTGACGAGGGCTAT
>probe:Drosophila_2:1623728_at:4:609; Interrogation_Position=14; Antisense; TGAGTCTCTGCCCTGAGGTTAATCC
>probe:Drosophila_2:1623728_at:299:525; Interrogation_Position=150; Antisense; GGGCTATCTGAAGTTCCTCGAGGTG
>probe:Drosophila_2:1623728_at:673:373; Interrogation_Position=159; Antisense; GAAGTTCCTCGAGGTGACCATTAAG
>probe:Drosophila_2:1623728_at:234:533; Interrogation_Position=171; Antisense; GGTGACCATTAAGCATCAGCAGGAA
>probe:Drosophila_2:1623728_at:384:647; Interrogation_Position=186; Antisense; TCAGCAGGAACTCAGGGATCGAAGA
>probe:Drosophila_2:1623728_at:209:643; Interrogation_Position=20; Antisense; TCTGCCCTGAGGTTAATCCGAATCT
>probe:Drosophila_2:1623728_at:284:545; Interrogation_Position=201; Antisense; GGATCGAAGAACTGCCCAAACCACC
>probe:Drosophila_2:1623728_at:709:309; Interrogation_Position=216; Antisense; CCAAACCACCGACTCTTTAGATTAG
>probe:Drosophila_2:1623728_at:414:45; Interrogation_Position=35; Antisense; ATCCGAATCTGGATCAGGACCTTGA
>probe:Drosophila_2:1623728_at:443:35; Interrogation_Position=47; Antisense; ATCAGGACCTTGAGGATATTCCCAA
>probe:Drosophila_2:1623728_at:538:389; Interrogation_Position=73; Antisense; GAAACAGGAACGTTTCACTGCCTGG
>probe:Drosophila_2:1623728_at:231:259; Interrogation_Position=88; Antisense; CACTGCCTGGACTACGTGTACGAGA

Paste this into a BLAST search page for me
CGTGTACGAGAGTTCTTCCGAGGATGATCGAACCCATTGACGAGGGCTATTGAGTCTCTGCCCTGAGGTTAATCCGGGCTATCTGAAGTTCCTCGAGGTGGAAGTTCCTCGAGGTGACCATTAAGGGTGACCATTAAGCATCAGCAGGAATCAGCAGGAACTCAGGGATCGAAGATCTGCCCTGAGGTTAATCCGAATCTGGATCGAAGAACTGCCCAAACCACCCCAAACCACCGACTCTTTAGATTAGATCCGAATCTGGATCAGGACCTTGAATCAGGACCTTGAGGATATTCCCAAGAAACAGGAACGTTTCACTGCCTGGCACTGCCTGGACTACGTGTACGAGA

Full Affymetrix probeset data:

Annotations for 1623728_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720