FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623777_s_at:

>probe:Drosophila_2:1623777_s_at:495:81; Interrogation_Position=3261; Antisense; AGGGCGCTGCTACTGTTGTACAAAG
>probe:Drosophila_2:1623777_s_at:534:217; Interrogation_Position=3289; Antisense; AAGTATATCCTGCATATCTGGCAAA
>probe:Drosophila_2:1623777_s_at:32:331; Interrogation_Position=3457; Antisense; GCGGCAATGCGTAATCCACTTTTGT
>probe:Drosophila_2:1623777_s_at:489:483; Interrogation_Position=3480; Antisense; GTAGATAGCCTTTAGGCCGACCTTT
>probe:Drosophila_2:1623777_s_at:500:401; Interrogation_Position=3498; Antisense; GACCTTTAGGCCAAGTGACAAACGC
>probe:Drosophila_2:1623777_s_at:633:373; Interrogation_Position=3526; Antisense; GAAGTTACAATCTTCCACCCAGAGT
>probe:Drosophila_2:1623777_s_at:646:397; Interrogation_Position=3573; Antisense; GACACACTGACTACCTGACATGAAC
>probe:Drosophila_2:1623777_s_at:332:401; Interrogation_Position=3589; Antisense; GACATGAACCACCTACACAGTACAG
>probe:Drosophila_2:1623777_s_at:195:105; Interrogation_Position=3612; Antisense; AGAAAACCTGGTGCCGAAGCCGAGA
>probe:Drosophila_2:1623777_s_at:318:107; Interrogation_Position=3645; Antisense; AGAACAGCCGGCGTCGTGATAACAC
>probe:Drosophila_2:1623777_s_at:274:275; Interrogation_Position=3681; Antisense; CTTTCACTTGTTGTTAGATTCCGGA
>probe:Drosophila_2:1623777_s_at:316:215; Interrogation_Position=3720; Antisense; AAGATAGTTAACACGCGGAAGCCAC
>probe:Drosophila_2:1623777_s_at:535:203; Interrogation_Position=3738; Antisense; AAGCCACGTAGCGATTTCTTCTTAG
>probe:Drosophila_2:1623777_s_at:422:643; Interrogation_Position=3754; Antisense; TCTTCTTAGCCACGAGTTCTTGCAA

Paste this into a BLAST search page for me
AGGGCGCTGCTACTGTTGTACAAAGAAGTATATCCTGCATATCTGGCAAAGCGGCAATGCGTAATCCACTTTTGTGTAGATAGCCTTTAGGCCGACCTTTGACCTTTAGGCCAAGTGACAAACGCGAAGTTACAATCTTCCACCCAGAGTGACACACTGACTACCTGACATGAACGACATGAACCACCTACACAGTACAGAGAAAACCTGGTGCCGAAGCCGAGAAGAACAGCCGGCGTCGTGATAACACCTTTCACTTGTTGTTAGATTCCGGAAAGATAGTTAACACGCGGAAGCCACAAGCCACGTAGCGATTTCTTCTTAGTCTTCTTAGCCACGAGTTCTTGCAA

Full Affymetrix probeset data:

Annotations for 1623777_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720