FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623804_a_at:

>probe:Drosophila_2:1623804_a_at:641:575; Interrogation_Position=2452; Antisense; GGCGACTGGAAGTGCGATCGGTTCT
>probe:Drosophila_2:1623804_a_at:397:289; Interrogation_Position=2482; Antisense; CGGATCTCTCGCAGGATCAGGATCA
>probe:Drosophila_2:1623804_a_at:98:77; Interrogation_Position=2506; Antisense; AGGATCCGCAGGTGGAGCTGTAAAA
>probe:Drosophila_2:1623804_a_at:103:415; Interrogation_Position=2520; Antisense; GAGCTGTAAAATATGGTAGGGCGAC
>probe:Drosophila_2:1623804_a_at:364:25; Interrogation_Position=2530; Antisense; ATATGGTAGGGCGACAACGTATGCG
>probe:Drosophila_2:1623804_a_at:510:525; Interrogation_Position=2555; Antisense; GGGCAGAGTCCCACAAATCCGCAGA
>probe:Drosophila_2:1623804_a_at:650:431; Interrogation_Position=2560; Antisense; GAGTCCCACAAATCCGCAGAAGACA
>probe:Drosophila_2:1623804_a_at:55:377; Interrogation_Position=2578; Antisense; GAAGACAATAAAACCCACTCAGATA
>probe:Drosophila_2:1623804_a_at:200:281; Interrogation_Position=2595; Antisense; CTCAGATACCGAGTTACCAGCAGCA
>probe:Drosophila_2:1623804_a_at:474:359; Interrogation_Position=2617; Antisense; GCAACAGTCGCAGTTTTTCATGCAA
>probe:Drosophila_2:1623804_a_at:264:351; Interrogation_Position=2626; Antisense; GCAGTTTTTCATGCAATCAGCCACA
>probe:Drosophila_2:1623804_a_at:652:697; Interrogation_Position=2632; Antisense; TTTCATGCAATCAGCCACACAACTA
>probe:Drosophila_2:1623804_a_at:425:187; Interrogation_Position=2674; Antisense; AACACCGACGGCAACGACAAACTGT
>probe:Drosophila_2:1623804_a_at:256:141; Interrogation_Position=2681; Antisense; ACGGCAACGACAAACTGTTTCGGCG

Paste this into a BLAST search page for me
GGCGACTGGAAGTGCGATCGGTTCTCGGATCTCTCGCAGGATCAGGATCAAGGATCCGCAGGTGGAGCTGTAAAAGAGCTGTAAAATATGGTAGGGCGACATATGGTAGGGCGACAACGTATGCGGGGCAGAGTCCCACAAATCCGCAGAGAGTCCCACAAATCCGCAGAAGACAGAAGACAATAAAACCCACTCAGATACTCAGATACCGAGTTACCAGCAGCAGCAACAGTCGCAGTTTTTCATGCAAGCAGTTTTTCATGCAATCAGCCACATTTCATGCAATCAGCCACACAACTAAACACCGACGGCAACGACAAACTGTACGGCAACGACAAACTGTTTCGGCG

Full Affymetrix probeset data:

Annotations for 1623804_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720