FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623826_at:

>probe:Drosophila_2:1623826_at:426:107; Interrogation_Position=1032; Antisense; AGAACACTTGCAGCGGGTTGGACAT
>probe:Drosophila_2:1623826_at:484:541; Interrogation_Position=1047; Antisense; GGTTGGACATTTCGATCCTGTGACA
>probe:Drosophila_2:1623826_at:465:449; Interrogation_Position=1060; Antisense; GATCCTGTGACACGCGTTAAGCTCA
>probe:Drosophila_2:1623826_at:92:475; Interrogation_Position=1075; Antisense; GTTAAGCTCACTCAGGATCAACTAA
>probe:Drosophila_2:1623826_at:631:517; Interrogation_Position=1123; Antisense; GTGGTTGACTCTTTTATTGCCGAGA
>probe:Drosophila_2:1623826_at:432:667; Interrogation_Position=1173; Antisense; TACTTATTAGTTGGCATTGTCATTG
>probe:Drosophila_2:1623826_at:597:667; Interrogation_Position=1213; Antisense; TAGAACCCAGTTCCCATTGTCTAAA
>probe:Drosophila_2:1623826_at:714:199; Interrogation_Position=786; Antisense; AAGCCGTTTGGCCAATTTAAAGCTG
>probe:Drosophila_2:1623826_at:252:559; Interrogation_Position=814; Antisense; GGAAATGTACACGATGAGCAGCTGA
>probe:Drosophila_2:1623826_at:502:421; Interrogation_Position=859; Antisense; GAGCAAGAATGCGATGACCATATTA
>probe:Drosophila_2:1623826_at:418:675; Interrogation_Position=899; Antisense; TATTTTCTAAGGTTGACGAACGTCG
>probe:Drosophila_2:1623826_at:226:373; Interrogation_Position=934; Antisense; GAAGTTCCCGATTTTCTATGTGGCA
>probe:Drosophila_2:1623826_at:489:659; Interrogation_Position=977; Antisense; TAACAGACCCTGTGATAACTCCATC
>probe:Drosophila_2:1623826_at:567:193; Interrogation_Position=993; Antisense; AACTCCATCTGGAATTACGTATGAA

Paste this into a BLAST search page for me
AGAACACTTGCAGCGGGTTGGACATGGTTGGACATTTCGATCCTGTGACAGATCCTGTGACACGCGTTAAGCTCAGTTAAGCTCACTCAGGATCAACTAAGTGGTTGACTCTTTTATTGCCGAGATACTTATTAGTTGGCATTGTCATTGTAGAACCCAGTTCCCATTGTCTAAAAAGCCGTTTGGCCAATTTAAAGCTGGGAAATGTACACGATGAGCAGCTGAGAGCAAGAATGCGATGACCATATTATATTTTCTAAGGTTGACGAACGTCGGAAGTTCCCGATTTTCTATGTGGCATAACAGACCCTGTGATAACTCCATCAACTCCATCTGGAATTACGTATGAA

Full Affymetrix probeset data:

Annotations for 1623826_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720