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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623849_s_at:

>probe:Drosophila_2:1623849_s_at:573:45; Interrogation_Position=1012; Antisense; ATGCCTACTGGCTGGCCTTTAAGAA
>probe:Drosophila_2:1623849_s_at:727:105; Interrogation_Position=1033; Antisense; AGAAAGCACTCGATGACCTTGGCCT
>probe:Drosophila_2:1623849_s_at:707:273; Interrogation_Position=1050; Antisense; CTTGGCCTCAAGACACGGGTTCGTG
>probe:Drosophila_2:1623849_s_at:53:577; Interrogation_Position=1083; Antisense; GGCGCCACGGACAGTCGTTATATTC
>probe:Drosophila_2:1623849_s_at:212:703; Interrogation_Position=1100; Antisense; TTATATTCGCTACGCAGGCATTCCA
>probe:Drosophila_2:1623849_s_at:457:69; Interrogation_Position=1115; Antisense; AGGCATTCCAGCTCTAGGATTCTCG
>probe:Drosophila_2:1623849_s_at:217:615; Interrogation_Position=1165; Antisense; TGCACGACCACGATGAATTCCTGAA
>probe:Drosophila_2:1623849_s_at:610:361; Interrogation_Position=1179; Antisense; GAATTCCTGAAAGCCGATACCTATT
>probe:Drosophila_2:1623849_s_at:219:709; Interrogation_Position=1220; Antisense; TTACAAGAAGCTCATTCCTGCCGTA
>probe:Drosophila_2:1623849_s_at:131:241; Interrogation_Position=1372; Antisense; AATAAGCCAGTCCATAGTCCATACC
>probe:Drosophila_2:1623849_s_at:582:117; Interrogation_Position=860; Antisense; AGCTGTATTTGATATCCGCATTGCC
>probe:Drosophila_2:1623849_s_at:512:519; Interrogation_Position=891; Antisense; GTGGATATCCCTGCCTTTGAGAAGC
>probe:Drosophila_2:1623849_s_at:318:441; Interrogation_Position=968; Antisense; GATGAAAAACCCCTTTGTGGAGCCA
>probe:Drosophila_2:1623849_s_at:392:463; Interrogation_Position=998; Antisense; GATTGACTCGTCGAATGCCTACTGG

Paste this into a BLAST search page for me
ATGCCTACTGGCTGGCCTTTAAGAAAGAAAGCACTCGATGACCTTGGCCTCTTGGCCTCAAGACACGGGTTCGTGGGCGCCACGGACAGTCGTTATATTCTTATATTCGCTACGCAGGCATTCCAAGGCATTCCAGCTCTAGGATTCTCGTGCACGACCACGATGAATTCCTGAAGAATTCCTGAAAGCCGATACCTATTTTACAAGAAGCTCATTCCTGCCGTAAATAAGCCAGTCCATAGTCCATACCAGCTGTATTTGATATCCGCATTGCCGTGGATATCCCTGCCTTTGAGAAGCGATGAAAAACCCCTTTGTGGAGCCAGATTGACTCGTCGAATGCCTACTGG

Full Affymetrix probeset data:

Annotations for 1623849_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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