FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623868_a_at:

>probe:Drosophila_2:1623868_a_at:202:355; Interrogation_Position=3246; Antisense; GCACGAGTTGCTCCTGAACAAGCTA
>probe:Drosophila_2:1623868_a_at:631:73; Interrogation_Position=3320; Antisense; AGGAGCCCTGGACAGAGCTGATCAT
>probe:Drosophila_2:1623868_a_at:30:365; Interrogation_Position=3375; Antisense; GAATAAGGAACTGCTCAGCCCCATG
>probe:Drosophila_2:1623868_a_at:97:581; Interrogation_Position=3398; Antisense; TGGCCATTTCGGCACTTTCAGTGGG
>probe:Drosophila_2:1623868_a_at:532:277; Interrogation_Position=3457; Antisense; CTATTTGAACCTTTACAGCGTCCAG
>probe:Drosophila_2:1623868_a_at:340:543; Interrogation_Position=3507; Antisense; GGATATGGATTTCTTCACCCTGAAC
>probe:Drosophila_2:1623868_a_at:300:387; Interrogation_Position=3528; Antisense; GAACAAGCGCTACATCGAGCTCAAG
>probe:Drosophila_2:1623868_a_at:421:419; Interrogation_Position=3544; Antisense; GAGCTCAAGCTACTGACTTTCCTAA
>probe:Drosophila_2:1623868_a_at:159:97; Interrogation_Position=3580; Antisense; AGAGACTTTCGTCACAAGTTCGCCC
>probe:Drosophila_2:1623868_a_at:573:403; Interrogation_Position=3613; Antisense; GACTTTCTCAAATTGGACCTGGCTG
>probe:Drosophila_2:1623868_a_at:335:413; Interrogation_Position=3628; Antisense; GACCTGGCTGATTACGAGCGATACA
>probe:Drosophila_2:1623868_a_at:551:165; Interrogation_Position=3666; Antisense; AAATGATTCGTCGTCGGACTTGAGT
>probe:Drosophila_2:1623868_a_at:527:93; Interrogation_Position=3713; Antisense; AGCAGTCTGGTTGTGTACTTTCCGA
>probe:Drosophila_2:1623868_a_at:552:631; Interrogation_Position=3733; Antisense; TCCGATTTTCATGTGCAGTGCTCAG

Paste this into a BLAST search page for me
GCACGAGTTGCTCCTGAACAAGCTAAGGAGCCCTGGACAGAGCTGATCATGAATAAGGAACTGCTCAGCCCCATGTGGCCATTTCGGCACTTTCAGTGGGCTATTTGAACCTTTACAGCGTCCAGGGATATGGATTTCTTCACCCTGAACGAACAAGCGCTACATCGAGCTCAAGGAGCTCAAGCTACTGACTTTCCTAAAGAGACTTTCGTCACAAGTTCGCCCGACTTTCTCAAATTGGACCTGGCTGGACCTGGCTGATTACGAGCGATACAAAATGATTCGTCGTCGGACTTGAGTAGCAGTCTGGTTGTGTACTTTCCGATCCGATTTTCATGTGCAGTGCTCAG

Full Affymetrix probeset data:

Annotations for 1623868_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720