FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623877_a_at:

>probe:Drosophila_2:1623877_a_at:677:445; Interrogation_Position=1453; Antisense; GATCCCTATTGCACCGGATGTCCGG
>probe:Drosophila_2:1623877_a_at:281:579; Interrogation_Position=1476; Antisense; GGCCAGTCCGCACTACATAAACAAG
>probe:Drosophila_2:1623877_a_at:532:185; Interrogation_Position=1495; Antisense; AACAAGGCGGCAGGTCAGCCGTGTC
>probe:Drosophila_2:1623877_a_at:64:567; Interrogation_Position=1555; Antisense; GGCGGAGGTGGTTCATCCAAATCCA
>probe:Drosophila_2:1623877_a_at:438:533; Interrogation_Position=1561; Antisense; GGTGGTTCATCCAAATCCAGCGGAA
>probe:Drosophila_2:1623877_a_at:29:233; Interrogation_Position=1574; Antisense; AATCCAGCGGAAGCCAAGGCGGATC
>probe:Drosophila_2:1623877_a_at:615:97; Interrogation_Position=1688; Antisense; AGATGCCGTACGTCTGCTCGTGGAT
>probe:Drosophila_2:1623877_a_at:66:139; Interrogation_Position=1697; Antisense; ACGTCTGCTCGTGGATCGGCAGCGA
>probe:Drosophila_2:1623877_a_at:662:447; Interrogation_Position=1720; Antisense; GATGCCGCGTACTGTGGCAAGCGAT
>probe:Drosophila_2:1623877_a_at:368:463; Interrogation_Position=1742; Antisense; GATTCGGCACCTCCGACGACCTGTT
>probe:Drosophila_2:1623877_a_at:593:409; Interrogation_Position=1756; Antisense; GACGACCTGTTCCAGCATCTGCGCA
>probe:Drosophila_2:1623877_a_at:205:471; Interrogation_Position=1795; Antisense; GTTCCGGACGCAGTACTGAGTGCAG
>probe:Drosophila_2:1623877_a_at:101:483; Interrogation_Position=1832; Antisense; GTATACCGCCCAATCATCCGCTTTT
>probe:Drosophila_2:1623877_a_at:406:597; Interrogation_Position=1892; Antisense; TGTCGGCGGCCCGTTATCATCCGTA

Paste this into a BLAST search page for me
GATCCCTATTGCACCGGATGTCCGGGGCCAGTCCGCACTACATAAACAAGAACAAGGCGGCAGGTCAGCCGTGTCGGCGGAGGTGGTTCATCCAAATCCAGGTGGTTCATCCAAATCCAGCGGAAAATCCAGCGGAAGCCAAGGCGGATCAGATGCCGTACGTCTGCTCGTGGATACGTCTGCTCGTGGATCGGCAGCGAGATGCCGCGTACTGTGGCAAGCGATGATTCGGCACCTCCGACGACCTGTTGACGACCTGTTCCAGCATCTGCGCAGTTCCGGACGCAGTACTGAGTGCAGGTATACCGCCCAATCATCCGCTTTTTGTCGGCGGCCCGTTATCATCCGTA

Full Affymetrix probeset data:

Annotations for 1623877_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720