FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623906_at:

>probe:Drosophila_2:1623906_at:619:465; Interrogation_Position=1166; Antisense; GTATTCTAGGCTCTTACAAAATTCA
>probe:Drosophila_2:1623906_at:353:175; Interrogation_Position=1195; Antisense; AAACCATTCTTCTAATGTGGCATTC
>probe:Drosophila_2:1623906_at:394:343; Interrogation_Position=675; Antisense; GCTTCGAGCACTCTGCGAACATGGA
>probe:Drosophila_2:1623906_at:435:325; Interrogation_Position=689; Antisense; GCGAACATGGAACAGCTGCAGATAC
>probe:Drosophila_2:1623906_at:235:165; Interrogation_Position=726; Antisense; AAATCGCCAGCCATGAACTTCAGTG
>probe:Drosophila_2:1623906_at:294:53; Interrogation_Position=738; Antisense; ATGAACTTCAGTGCACTCAGGCCCT
>probe:Drosophila_2:1623906_at:305:647; Interrogation_Position=754; Antisense; TCAGGCCCTGCGATTTTTCATCGAA
>probe:Drosophila_2:1623906_at:631:301; Interrogation_Position=780; Antisense; CCGCTTCGGGACAACTATACGACAT
>probe:Drosophila_2:1623906_at:241:687; Interrogation_Position=795; Antisense; TATACGACATGTGCGGCAGCTGCGA
>probe:Drosophila_2:1623906_at:8:283; Interrogation_Position=826; Antisense; CTCCTCCGTCTAGGTCGTTTATGGA
>probe:Drosophila_2:1623906_at:237:703; Interrogation_Position=844; Antisense; TTATGGAGCTGGTTTCTACCGCTGA
>probe:Drosophila_2:1623906_at:287:673; Interrogation_Position=860; Antisense; TACCGCTGACTGCTGATAGCTAGTT
>probe:Drosophila_2:1623906_at:536:649; Interrogation_Position=932; Antisense; TCAGACAGTCTTATCAGTTTGGAAA
>probe:Drosophila_2:1623906_at:311:449; Interrogation_Position=985; Antisense; GATCCGAAGGCTTTATATGCGTATT

Paste this into a BLAST search page for me
GTATTCTAGGCTCTTACAAAATTCAAAACCATTCTTCTAATGTGGCATTCGCTTCGAGCACTCTGCGAACATGGAGCGAACATGGAACAGCTGCAGATACAAATCGCCAGCCATGAACTTCAGTGATGAACTTCAGTGCACTCAGGCCCTTCAGGCCCTGCGATTTTTCATCGAACCGCTTCGGGACAACTATACGACATTATACGACATGTGCGGCAGCTGCGACTCCTCCGTCTAGGTCGTTTATGGATTATGGAGCTGGTTTCTACCGCTGATACCGCTGACTGCTGATAGCTAGTTTCAGACAGTCTTATCAGTTTGGAAAGATCCGAAGGCTTTATATGCGTATT

Full Affymetrix probeset data:

Annotations for 1623906_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720