FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623909_s_at:

>probe:Drosophila_2:1623909_s_at:156:627; Interrogation_Position=2824; Antisense; TGCCGGAGGACAAAAGGCCGCGAAC
>probe:Drosophila_2:1623909_s_at:61:297; Interrogation_Position=2844; Antisense; CGAACGGCCTTCAGCGGAACGCAGT
>probe:Drosophila_2:1623909_s_at:502:331; Interrogation_Position=2857; Antisense; GCGGAACGCAGTTGGCCAGACTGAA
>probe:Drosophila_2:1623909_s_at:302:579; Interrogation_Position=2870; Antisense; GGCCAGACTGAAGCACGAGTTCAAC
>probe:Drosophila_2:1623909_s_at:411:683; Interrogation_Position=2904; Antisense; TATCTGACGGAGAAGCGACGCCAGC
>probe:Drosophila_2:1623909_s_at:145:613; Interrogation_Position=2998; Antisense; TGAAAAAGTCGAGCGGCACCAAGAA
>probe:Drosophila_2:1623909_s_at:336:567; Interrogation_Position=3012; Antisense; GGCACCAAGAATCCGCTGGCGCTGC
>probe:Drosophila_2:1623909_s_at:390:309; Interrogation_Position=3136; Antisense; CCAAGGAGCCCTGCTAGAAGGAGGT
>probe:Drosophila_2:1623909_s_at:71:533; Interrogation_Position=3162; Antisense; GGGTGTGCGGCAATATCTACAATCT
>probe:Drosophila_2:1623909_s_at:463:357; Interrogation_Position=3208; Antisense; GCACACGCAGTCGAACGCAGAATCA
>probe:Drosophila_2:1623909_s_at:309:395; Interrogation_Position=3239; Antisense; GAAATCTTCCGGAGAATTGGCCGCT
>probe:Drosophila_2:1623909_s_at:148:363; Interrogation_Position=3252; Antisense; GAATTGGCCGCTGGGCGTAGAAATC
>probe:Drosophila_2:1623909_s_at:719:301; Interrogation_Position=3277; Antisense; CCCCGAAGAGCTATGATTGTGTGTG
>probe:Drosophila_2:1623909_s_at:442:59; Interrogation_Position=3289; Antisense; ATGATTGTGTGTGCGTTTTGTATAA

Paste this into a BLAST search page for me
TGCCGGAGGACAAAAGGCCGCGAACCGAACGGCCTTCAGCGGAACGCAGTGCGGAACGCAGTTGGCCAGACTGAAGGCCAGACTGAAGCACGAGTTCAACTATCTGACGGAGAAGCGACGCCAGCTGAAAAAGTCGAGCGGCACCAAGAAGGCACCAAGAATCCGCTGGCGCTGCCCAAGGAGCCCTGCTAGAAGGAGGTGGGTGTGCGGCAATATCTACAATCTGCACACGCAGTCGAACGCAGAATCAGAAATCTTCCGGAGAATTGGCCGCTGAATTGGCCGCTGGGCGTAGAAATCCCCCGAAGAGCTATGATTGTGTGTGATGATTGTGTGTGCGTTTTGTATAA

Full Affymetrix probeset data:

Annotations for 1623909_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720