FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623919_a_at:

>probe:Drosophila_2:1623919_a_at:689:231; Interrogation_Position=1723; Antisense; AATCCCCGCCAAGAAGGATGTCGAG
>probe:Drosophila_2:1623919_a_at:193:275; Interrogation_Position=1801; Antisense; CATTGACCCTGTTGTAGAGGTGGCT
>probe:Drosophila_2:1623919_a_at:164:319; Interrogation_Position=1851; Antisense; GCCGATCCATCTGCTCAATTATGTA
>probe:Drosophila_2:1623919_a_at:135:265; Interrogation_Position=1894; Antisense; CATAATACCCTTCCCTTAGTTGATA
>probe:Drosophila_2:1623919_a_at:505:599; Interrogation_Position=1923; Antisense; TGTCTTAGCATATCTGTTTCACCCT
>probe:Drosophila_2:1623919_a_at:285:39; Interrogation_Position=1934; Antisense; ATCTGTTTCACCCTCTTTGGTAATT
>probe:Drosophila_2:1623919_a_at:505:477; Interrogation_Position=1993; Antisense; GTTTTATAGCTAGGACTCGTCGGGT
>probe:Drosophila_2:1623919_a_at:561:397; Interrogation_Position=2006; Antisense; GACTCGTCGGGTCGTTTTTCGTCAG
>probe:Drosophila_2:1623919_a_at:112:561; Interrogation_Position=2030; Antisense; GGAAAATCACCGTTCTGTCACAGAT
>probe:Drosophila_2:1623919_a_at:110:495; Interrogation_Position=2046; Antisense; GTCACAGATTCCTTGCTGGTTGTCT
>probe:Drosophila_2:1623919_a_at:534:395; Interrogation_Position=2093; Antisense; GACAACCACCGACGAATCTGACGAT
>probe:Drosophila_2:1623919_a_at:154:41; Interrogation_Position=2108; Antisense; ATCTGACGATCTGTACCCAGGCAAA
>probe:Drosophila_2:1623919_a_at:244:511; Interrogation_Position=2206; Antisense; GTGAAAGTCTTTTCGCCGAGTTCAT
>probe:Drosophila_2:1623919_a_at:486:429; Interrogation_Position=2223; Antisense; GAGTTCATGTATTGTTTCGCTATAT

Paste this into a BLAST search page for me
AATCCCCGCCAAGAAGGATGTCGAGCATTGACCCTGTTGTAGAGGTGGCTGCCGATCCATCTGCTCAATTATGTACATAATACCCTTCCCTTAGTTGATATGTCTTAGCATATCTGTTTCACCCTATCTGTTTCACCCTCTTTGGTAATTGTTTTATAGCTAGGACTCGTCGGGTGACTCGTCGGGTCGTTTTTCGTCAGGGAAAATCACCGTTCTGTCACAGATGTCACAGATTCCTTGCTGGTTGTCTGACAACCACCGACGAATCTGACGATATCTGACGATCTGTACCCAGGCAAAGTGAAAGTCTTTTCGCCGAGTTCATGAGTTCATGTATTGTTTCGCTATAT

Full Affymetrix probeset data:

Annotations for 1623919_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720