FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623931_s_at:

>probe:Drosophila_2:1623931_s_at:184:549; Interrogation_Position=2141; Antisense; GGAGGAGGGCCAGAAATCACTGTCA
>probe:Drosophila_2:1623931_s_at:306:523; Interrogation_Position=2147; Antisense; GGGCCAGAAATCACTGTCAGCCGCG
>probe:Drosophila_2:1623931_s_at:366:165; Interrogation_Position=2154; Antisense; AAATCACTGTCAGCCGCGGCAGCAG
>probe:Drosophila_2:1623931_s_at:363:353; Interrogation_Position=2178; Antisense; GCAGCGGCCAATGCAAATGCGAATT
>probe:Drosophila_2:1623931_s_at:469:355; Interrogation_Position=2190; Antisense; GCAAATGCGAATTCAATCAATGGAT
>probe:Drosophila_2:1623931_s_at:482:239; Interrogation_Position=2203; Antisense; CAATCAATGGATAATTCTAAGTCAG
>probe:Drosophila_2:1623931_s_at:455:713; Interrogation_Position=2217; Antisense; TTCTAAGTCAGTTAGCACCAGCTAC
>probe:Drosophila_2:1623931_s_at:269:89; Interrogation_Position=2222; Antisense; AGTCAGTTAGCACCAGCTACAGCTG
>probe:Drosophila_2:1623931_s_at:522:117; Interrogation_Position=2236; Antisense; AGCTACAGCTGCAGCTACATATGTA
>probe:Drosophila_2:1623931_s_at:305:335; Interrogation_Position=2243; Antisense; GCTGCAGCTACATATGTAACAGTCA
>probe:Drosophila_2:1623931_s_at:366:187; Interrogation_Position=2260; Antisense; AACAGTCAAGTTAGTCAGTCGGATC
>probe:Drosophila_2:1623931_s_at:356:475; Interrogation_Position=2269; Antisense; GTTAGTCAGTCGGATCGATGGGTCC
>probe:Drosophila_2:1623931_s_at:141:41; Interrogation_Position=2282; Antisense; ATCGATGGGTCCTCTAGGGATCCGG
>probe:Drosophila_2:1623931_s_at:67:627; Interrogation_Position=2291; Antisense; TCCTCTAGGGATCCGGTTGGTCCAG

Paste this into a BLAST search page for me
GGAGGAGGGCCAGAAATCACTGTCAGGGCCAGAAATCACTGTCAGCCGCGAAATCACTGTCAGCCGCGGCAGCAGGCAGCGGCCAATGCAAATGCGAATTGCAAATGCGAATTCAATCAATGGATCAATCAATGGATAATTCTAAGTCAGTTCTAAGTCAGTTAGCACCAGCTACAGTCAGTTAGCACCAGCTACAGCTGAGCTACAGCTGCAGCTACATATGTAGCTGCAGCTACATATGTAACAGTCAAACAGTCAAGTTAGTCAGTCGGATCGTTAGTCAGTCGGATCGATGGGTCCATCGATGGGTCCTCTAGGGATCCGGTCCTCTAGGGATCCGGTTGGTCCAG

Full Affymetrix probeset data:

Annotations for 1623931_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720