FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623952_a_at:

>probe:Drosophila_2:1623952_a_at:334:675; Interrogation_Position=3050; Antisense; TAGTTTGTTTAATTCGTAGACGCAA
>probe:Drosophila_2:1623952_a_at:298:677; Interrogation_Position=3066; Antisense; TAGACGCAATGCCAGACCAGGCCAT
>probe:Drosophila_2:1623952_a_at:87:125; Interrogation_Position=3081; Antisense; ACCAGGCCATTTTGCAAACCCTAAG
>probe:Drosophila_2:1623952_a_at:473:195; Interrogation_Position=3149; Antisense; AACTGATTGATCATGTTGGACATTT
>probe:Drosophila_2:1623952_a_at:514:183; Interrogation_Position=3207; Antisense; AAAATCGTTCATTTGGTTCGTTGCT
>probe:Drosophila_2:1623952_a_at:50:541; Interrogation_Position=3221; Antisense; GGTTCGTTGCTACCAGTTGCTACGC
>probe:Drosophila_2:1623952_a_at:100:95; Interrogation_Position=3235; Antisense; AGTTGCTACGCCACAATTGTATCTA
>probe:Drosophila_2:1623952_a_at:561:659; Interrogation_Position=3297; Antisense; TAAACTTAACAAATCTACAGGGCTA
>probe:Drosophila_2:1623952_a_at:84:459; Interrogation_Position=3345; Antisense; GATTTGAATTCCCATGCTTACACTT
>probe:Drosophila_2:1623952_a_at:221:277; Interrogation_Position=3361; Antisense; CTTACACTTCACATCCGGTTTGGAT
>probe:Drosophila_2:1623952_a_at:161:597; Interrogation_Position=3386; Antisense; TGTGTAAACCAACCTTTTGTGGCGA
>probe:Drosophila_2:1623952_a_at:302:235; Interrogation_Position=3549; Antisense; AATCCAGCAAGAACACTATCACTAG
>probe:Drosophila_2:1623952_a_at:523:147; Interrogation_Position=3563; Antisense; ACTATCACTAGAGCCTACGACTACA
>probe:Drosophila_2:1623952_a_at:245:663; Interrogation_Position=3618; Antisense; TAAAAATCCACTTCGAGCACACGCA

Paste this into a BLAST search page for me
TAGTTTGTTTAATTCGTAGACGCAATAGACGCAATGCCAGACCAGGCCATACCAGGCCATTTTGCAAACCCTAAGAACTGATTGATCATGTTGGACATTTAAAATCGTTCATTTGGTTCGTTGCTGGTTCGTTGCTACCAGTTGCTACGCAGTTGCTACGCCACAATTGTATCTATAAACTTAACAAATCTACAGGGCTAGATTTGAATTCCCATGCTTACACTTCTTACACTTCACATCCGGTTTGGATTGTGTAAACCAACCTTTTGTGGCGAAATCCAGCAAGAACACTATCACTAGACTATCACTAGAGCCTACGACTACATAAAAATCCACTTCGAGCACACGCA

Full Affymetrix probeset data:

Annotations for 1623952_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720