FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623954_s_at:

>probe:Drosophila_2:1623954_s_at:669:19; Interrogation_Position=1232; Antisense; ATTTGACCAGCATCCATAAGACTTA
>probe:Drosophila_2:1623954_s_at:105:15; Interrogation_Position=1274; Antisense; ATTTTCGTTCACACACCGCAAAGAT
>probe:Drosophila_2:1623954_s_at:622:7; Interrogation_Position=1297; Antisense; ATTGCGCCACACACACTTGAGAATT
>probe:Drosophila_2:1623954_s_at:50:61; Interrogation_Position=1325; Antisense; ATGTATTCCGCGAAGGTTGGCCTGA
>probe:Drosophila_2:1623954_s_at:71:581; Interrogation_Position=1342; Antisense; TGGCCTGATTTGGTTGATTTGGTTG
>probe:Drosophila_2:1623954_s_at:486:459; Interrogation_Position=1357; Antisense; GATTTGGTTGCCTGCAGAAGTCCTT
>probe:Drosophila_2:1623954_s_at:700:109; Interrogation_Position=1372; Antisense; AGAAGTCCTTTGCATCGCGTTGGAT
>probe:Drosophila_2:1623954_s_at:226:467; Interrogation_Position=1390; Antisense; GTTGGATCGCCAAATCAGGTTGACT
>probe:Drosophila_2:1623954_s_at:470:439; Interrogation_Position=1408; Antisense; GTTGACTGGCACTCGACTAAGGCAT
>probe:Drosophila_2:1623954_s_at:6:473; Interrogation_Position=1449; Antisense; GTTCTTTGTTCATACACGGACACGT
>probe:Drosophila_2:1623954_s_at:46:559; Interrogation_Position=1466; Antisense; GGACACGTACACCTTTATATAAATA
>probe:Drosophila_2:1623954_s_at:669:171; Interrogation_Position=1677; Antisense; AAAGCAAGCACTCGTTTCTATTCCC
>probe:Drosophila_2:1623954_s_at:508:193; Interrogation_Position=1703; Antisense; AACTCATCCTGCCACAGACGATAAT
>probe:Drosophila_2:1623954_s_at:646:65; Interrogation_Position=1732; Antisense; ATGGATCACCACACCTAATGCTAAT

Paste this into a BLAST search page for me
ATTTGACCAGCATCCATAAGACTTAATTTTCGTTCACACACCGCAAAGATATTGCGCCACACACACTTGAGAATTATGTATTCCGCGAAGGTTGGCCTGATGGCCTGATTTGGTTGATTTGGTTGGATTTGGTTGCCTGCAGAAGTCCTTAGAAGTCCTTTGCATCGCGTTGGATGTTGGATCGCCAAATCAGGTTGACTGTTGACTGGCACTCGACTAAGGCATGTTCTTTGTTCATACACGGACACGTGGACACGTACACCTTTATATAAATAAAAGCAAGCACTCGTTTCTATTCCCAACTCATCCTGCCACAGACGATAATATGGATCACCACACCTAATGCTAAT

Full Affymetrix probeset data:

Annotations for 1623954_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720