FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623957_s_at:

>probe:Drosophila_2:1623957_s_at:680:703; Interrogation_Position=1205; Antisense; TTATAATTCTCTTTGCATGGCGCTA
>probe:Drosophila_2:1623957_s_at:270:317; Interrogation_Position=1264; Antisense; GCCGTTCGTTAGCTTCTTCTGAAAT
>probe:Drosophila_2:1623957_s_at:386:677; Interrogation_Position=1338; Antisense; TAGAACATACATTTAGCGCACCTAT
>probe:Drosophila_2:1623957_s_at:153:325; Interrogation_Position=1353; Antisense; GCGCACCTATGCAGACATTTGCTGT
>probe:Drosophila_2:1623957_s_at:147:665; Interrogation_Position=1406; Antisense; TACAAAAGCTACGAGTGGTTCATCT
>probe:Drosophila_2:1623957_s_at:366:517; Interrogation_Position=1420; Antisense; GTGGTTCATCTTATAGGCGTATTCT
>probe:Drosophila_2:1623957_s_at:379:71; Interrogation_Position=1434; Antisense; AGGCGTATTCTATTGCAATTTATTC
>probe:Drosophila_2:1623957_s_at:450:249; Interrogation_Position=1449; Antisense; CAATTTATTCAATGCGGAGGGCTCA
>probe:Drosophila_2:1623957_s_at:13:699; Interrogation_Position=1481; Antisense; TTTAAAACAACACCAGCTAAGGCTG
>probe:Drosophila_2:1623957_s_at:380:697; Interrogation_Position=1532; Antisense; TTTTTTATACAACACGCCATCGCGG
>probe:Drosophila_2:1623957_s_at:629:267; Interrogation_Position=1560; Antisense; CAGGAATTTTCTTCGTCTCATCCAG
>probe:Drosophila_2:1623957_s_at:289:643; Interrogation_Position=1575; Antisense; TCTCATCCAGTTCCCTTTTAAGTAG
>probe:Drosophila_2:1623957_s_at:553:403; Interrogation_Position=1612; Antisense; GACTCACATCAATAGAACCGGTTTC
>probe:Drosophila_2:1623957_s_at:231:405; Interrogation_Position=1656; Antisense; GACTCTTACTGCCAAATTTCAAATG

Paste this into a BLAST search page for me
TTATAATTCTCTTTGCATGGCGCTAGCCGTTCGTTAGCTTCTTCTGAAATTAGAACATACATTTAGCGCACCTATGCGCACCTATGCAGACATTTGCTGTTACAAAAGCTACGAGTGGTTCATCTGTGGTTCATCTTATAGGCGTATTCTAGGCGTATTCTATTGCAATTTATTCCAATTTATTCAATGCGGAGGGCTCATTTAAAACAACACCAGCTAAGGCTGTTTTTTATACAACACGCCATCGCGGCAGGAATTTTCTTCGTCTCATCCAGTCTCATCCAGTTCCCTTTTAAGTAGGACTCACATCAATAGAACCGGTTTCGACTCTTACTGCCAAATTTCAAATG

Full Affymetrix probeset data:

Annotations for 1623957_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720